Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 AC022360.1-201ENST00000521058 340 ntBASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 AC034268.2-201ENST00000571784 482 ntBASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 AC090615.1-201ENST00000577519 154 ntBASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 AC010857.1-201ENST00000606398 594 ntBASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 AL158209.2-201ENST00000619266 216 ntBASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 CYP4F35P-202ENST00000636121 390 ntBASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 AC099654.13-201ENST00000639774 207 ntBASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM39Q9HCM9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC112198.2-201ENST00000426589 6996 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 ELF2P3-201ENST00000445099 1506 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 RNU1-19P-201ENST00000363306 165 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 SNORD82-201ENST00000365530 70 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 MIR105-1-201ENST00000385222 81 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 RPL31P1-201ENST00000398116 372 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 RPL30P3-201ENST00000424262 333 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 RPL7P11-201ENST00000437586 658 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 RPS20P32-201ENST00000456044 356 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 snoU13.8-201ENST00000458890 104 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 RN7SL214P-201ENST00000487317 265 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 HMGB1P36-201ENST00000487709 576 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC072052.1-201ENST00000496556 306 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 HMGN1P9-201ENST00000515212 298 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 LSM3P2-201ENST00000551246 273 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC084757.1-201ENST00000559987 490 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 CKS1BP3-201ENST00000600888 237 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 DUXAP4-201ENST00000603046 613 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC108738.1-201ENST00000603703 237 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 RNU6-87P-201ENST00000607561 108 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC011493.1-201ENST00000596753 1632 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AC095050.2-201ENST00000510748 1458 ntBASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM39Q9HCM9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 U3.7-201ENST00000363668 216 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 RNVU1-3-201ENST00000364313 161 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 RPS3AP36-201ENST00000398190 775 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms