Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
UBE2OQ9C0C9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 ASNSP1-204ENST00000641977 1664 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 RNA5SP131-201ENST00000365452 119 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 RNU4-2-201ENST00000365668 141 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 OR52E6-202ENST00000379946 954 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 RNU6-657P-201ENST00000383904 107 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 RNU6-639P-201ENST00000384074 107 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 Y_RNA.445-201ENST00000384168 102 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 NPM1P40-201ENST00000412758 733 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL357752.1-201ENST00000412817 349 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 NDUFB4P5-201ENST00000415445 361 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL645937.1-202ENST00000421799 937 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC006335.2-201ENST00000437993 330 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL136380.1-201ENST00000447970 162 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 snoU13.29-201ENST00000459370 104 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC090142.1-201ENST00000465776 462 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 MTND4P17-201ENST00000470444 350 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 RPL32P33-201ENST00000487023 394 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 RN7SL346P-201ENST00000491561 294 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC009120.1-201ENST00000493458 473 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC005741.1-201ENST00000511094 432 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC093677.1-201ENST00000514414 678 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC022616.6-201ENST00000520479 119 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC110588.1-201ENST00000559699 137 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 RPL10P14-201ENST00000565265 298 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 MRPS21P7-201ENST00000566937 238 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 XIAPP1-201ENST00000603162 600 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC010591.1-201ENST00000603941 649 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 RIOK3P1-201ENST00000418778 1528 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 AC016745.2-201ENST00000608834 3443 ntBASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE2OQ9C0C9 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 Y_RNA.46-201ENST00000362695 102 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 RNU6-251P-201ENST00000363235 104 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 RNU1-59P-201ENST00000364829 162 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 MIR23A-201ENST00000385245 73 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 RNU1-149P-201ENST00000390870 161 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AL034374.1-201ENST00000406329 351 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AC007562.1-201ENST00000421819 517 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 ATP5JP1-201ENST00000431631 322 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 RPS15AP9-201ENST00000439856 381 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 BNIP3P2-201ENST00000441221 577 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AC091153.1-201ENST00000466297 402 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AC021678.3-201ENST00000517893 476 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 OR5BN1P-201ENST00000532955 829 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 FRG2DP-202ENST00000566967 323 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 TXNP4-201ENST00000575018 310 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 MIR3167-201ENST00000579623 85 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AC119403.2-201ENST00000590960 598 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 U1.25-201ENST00000614085 162 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 U1.34-201ENST00000618578 162 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 U1.31-201ENST00000620022 160 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 AC140479.2-201ENST00000421567 3130 ntBASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE2OQ9C0C9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms