Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.398-201ENST00000383952 99 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-102P-201ENST00000384485 104 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SKP62-201ENST00000384539 329 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 MT-TC-201ENST00000387405 66 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 ENSAP1-201ENST00000392855 326 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC013442.1-201ENST00000397347 228 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-394P-201ENST00000410735 107 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SKP51-201ENST00000410781 304 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 CTSLP8-201ENST00000413075 967 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC140479.3-201ENST00000418944 1126 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RPL36P18-201ENST00000419316 318 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC093655.2-201ENST00000425735 631 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC087650.1-201ENST00000431445 468 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 MTCO1P5-201ENST00000433573 344 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC093414.1-201ENST00000434712 514 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC073587.1-201ENST00000447093 876 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 NUTF2P3-201ENST00000448540 384 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU7-87P-201ENST00000459343 62 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RPL23AP2-201ENST00000471227 466 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RPS14P8-201ENST00000478778 369 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RPS15AP34-201ENST00000487776 387 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-840P-201ENST00000517275 65 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 OR4H12P-201ENST00000556269 907 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 MIR4793-201ENST00000577502 87 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SL376P-201ENST00000578594 264 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 MIR4664-201ENST00000583819 71 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 PRPF19P1-201ENST00000584766 898 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC139493.1-201ENST00000604368 397 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 CUX2P1-201ENST00000606426 298 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RMST_4.1-201ENST00000616886 107 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 METAP1-212ENST00000625963 147 ntTSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 BX322639.1-202ENST00000423987 2213 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC105114.1-201ENST00000624795 1862 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC138907.8-201ENST00000623981 2256 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC097063.1-201ENST00000426714 1797 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms