Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC123786.2-201ENST00000603459 275 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 AC005084.1-201ENST00000605160 304 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 RNU6-88P-201ENST00000606801 100 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 AL136295.6-201ENST00000610486 658 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SNX18Q96RF0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 AC025588.4-201ENST00000615802 908 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 AC131238.1-201ENST00000617135 328 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 AL357080.1-201ENST00000617394 239 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 AC138932.5-201ENST00000617759 563 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 AC018816.2-201ENST00000621460 353 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 AC140113.4-201ENST00000622087 222 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.51□□□□□ -1.69
SNX18Q96RF0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX18Q96RF0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNX18Q96RF0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX18Q96RF0 AC017104.4-201ENST00000636283 1592 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.51□□□□□ -1.69
SNX18Q96RF0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX18Q96RF0 DDX18P3-201ENST00000404856 2007 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SNX18Q96RF0 SCARNA15-201ENST00000607520 4325 ntBASIC4.51□□□□□ -1.69
SNX18Q96RF0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
SNX18Q96RF0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX18Q96RF0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SNX18Q96RF0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX18Q96RF0 AC063976.2-201ENST00000425667 3556 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX18Q96RF0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC012020.1-201ENST00000624541 1728 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNX18Q96RF0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX18Q96RF0 SNRPEP3-201ENST00000338402 276 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 SNORA73.1-201ENST00000363107 205 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 RNU6-657P-201ENST00000383904 107 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 RNU6-723P-201ENST00000383973 107 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 RNU1-106P-201ENST00000384382 164 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 RNU6-348P-201ENST00000384386 107 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 AL078604.1-201ENST00000404609 466 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 HDGFP1-201ENST00000405943 252 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 RN7SKP126-201ENST00000411143 300 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 MTND1P23-201ENST00000416931 372 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 MTND4LP11-201ENST00000422184 280 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC073335.1-201ENST00000427776 363 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC010975.2-201ENST00000427781 588 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 YWHAZP8-201ENST00000436935 731 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 AL772161.1-201ENST00000439130 476 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 Z80107.2-201ENST00000445127 392 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 AL389915.2-201ENST00000454576 441 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 OR9M1P-201ENST00000459641 921 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 PRELID3BP7-201ENST00000503606 469 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 RPL37P25-201ENST00000507308 276 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 RN7SKP66-201ENST00000516681 231 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 DEFB131D-201ENST00000526803 184 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 OR5M2P-201ENST00000529003 936 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 EIF5A2P1-201ENST00000564027 460 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AP001004.1-201ENST00000582468 324 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC087783.2-201ENST00000605070 562 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 Mico1.1-201ENST00000611698 204 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC022306.2-201ENST00000617563 647 ntBASIC4.5□□□□□ -1.69
SNX18Q96RF0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNX18Q96RF0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX18Q96RF0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX18Q96RF0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX18Q96RF0 AC131971.1-201ENST00000332881 1482 ntBASIC4.49□□□□□ -1.69
SNX18Q96RF0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
SNX18Q96RF0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNX18Q96RF0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNX18Q96RF0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX18Q96RF0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SNX18Q96RF0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms