Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL645931.1-201ENST00000439737 410 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AC114755.5-201ENST00000447760 831 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.55□□□□□ -2
AP1S3Q96PC3 AC146507.2-201ENST00000460608 476 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.55□□□□□ -2
AP1S3Q96PC3 AC021205.2-201ENST00000480069 347 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 RN7SL459P-201ENST00000481078 302 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.55□□□□□ -2
AP1S3Q96PC3 TPT1P3-201ENST00000492841 512 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.55□□□□□ -2
AP1S3Q96PC3 AC147055.1-201ENST00000509261 750 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AC108064.1-201ENST00000513791 460 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.55□□□□□ -2
AP1S3Q96PC3 SCARNA14-201ENST00000516903 136 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 RNU6-352P-201ENST00000516908 107 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.55□□□□□ -2
AP1S3Q96PC3 RANP9-201ENST00000519957 271 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.55□□□□□ -2
AP1S3Q96PC3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.55□□□□□ -2
AP1S3Q96PC3 OR8L1P-201ENST00000534005 955 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 CR383656.6-201ENST00000550518 394 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.55□□□□□ -2
AP1S3Q96PC3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.55□□□□□ -2
AP1S3Q96PC3 AC017071.1-201ENST00000564407 2204 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AC006116.7-201ENST00000590141 756 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.55□□□□□ -2
AP1S3Q96PC3 AL590240.3-201ENST00000621416 943 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 FP236240.3-201ENST00000623061 327 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 RPL23AP61-201ENST00000623642 466 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AC004925.1-201ENST00000624256 2706 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.55□□□□□ -2
AP1S3Q96PC3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
AP1S3Q96PC3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
AP1S3Q96PC3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
AP1S3Q96PC3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
AP1S3Q96PC3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
AP1S3Q96PC3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.54□□□□□ -2
AP1S3Q96PC3 MTND5P19-201ENST00000424872 1794 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
AP1S3Q96PC3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.54□□□□□ -2
AP1S3Q96PC3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.54□□□□□ -2
AP1S3Q96PC3 RPL7P26-201ENST00000333817 754 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.54□□□□□ -2
AP1S3Q96PC3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
AP1S3Q96PC3 ST13P16-201ENST00000401760 781 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.54□□□□□ -2
AP1S3Q96PC3 HSPE1P1-201ENST00000421494 318 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 BRWD1P3-201ENST00000428816 390 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 MTCYBP29-201ENST00000436327 1006 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AC008264.1-201ENST00000447612 367 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.54□□□□□ -2
AP1S3Q96PC3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AL161747.1-201ENST00000480068 358 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AC108078.3-201ENST00000502633 489 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 AC010460.1-201ENST00000507087 466 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AC008083.2-201ENST00000546707 476 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AC025884.1-201ENST00000556034 378 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.54□□□□□ -2
AP1S3Q96PC3 AC010653.1-201ENST00000571108 881 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.54□□□□□ -2
AP1S3Q96PC3 MLECP1-201ENST00000615893 709 ntBASIC2.54□□□□□ -2
AP1S3Q96PC3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
AP1S3Q96PC3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
AP1S3Q96PC3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
AP1S3Q96PC3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.54□□□□□ -2
AP1S3Q96PC3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.54□□□□□ -2
AP1S3Q96PC3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.54□□□□□ -2
AP1S3Q96PC3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.54□□□□□ -2
AP1S3Q96PC3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.53□□□□□ -2
AP1S3Q96PC3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
AP1S3Q96PC3 AC090337.1-201ENST00000579651 2074 ntBASIC2.53□□□□□ -2
AP1S3Q96PC3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
AP1S3Q96PC3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.53□□□□□ -2
AP1S3Q96PC3 SPRR2C-201ENST00000290702 219 ntBASIC2.53□□□□□ -2
AP1S3Q96PC3 SNORA51.2-201ENST00000364595 132 ntBASIC2.53□□□□□ -2
AP1S3Q96PC3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.53□□□□□ -2
AP1S3Q96PC3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.53□□□□□ -2
AP1S3Q96PC3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.53□□□□□ -2
AP1S3Q96PC3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.53□□□□□ -2
AP1S3Q96PC3 RNA5SP317-201ENST00000410176 116 ntBASIC2.53□□□□□ -2
AP1S3Q96PC3 RNA5SP311-201ENST00000411290 116 ntBASIC2.53□□□□□ -2
AP1S3Q96PC3 RN7SKP53-201ENST00000411337 315 ntBASIC2.53□□□□□ -2
AP1S3Q96PC3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.53□□□□□ -2
AP1S3Q96PC3 RPL26P29-201ENST00000415623 438 ntBASIC2.53□□□□□ -2
AP1S3Q96PC3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.53□□□□□ -2
AP1S3Q96PC3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.53□□□□□ -2
AP1S3Q96PC3 SSXP9-201ENST00000417503 292 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms