Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOPBP1Q92547 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.06□□□□□ -1.6
TOPBP1Q92547 NPM1P11-201ENST00000417106 855 ntBASIC5.06□□□□□ -1.6
TOPBP1Q92547 AL513124.1-201ENST00000450410 614 ntBASIC5.06□□□□□ -1.6
TOPBP1Q92547 SNORD109B-201ENST00000458961 67 ntBASIC5.06□□□□□ -1.6
TOPBP1Q92547 SNORD109A-201ENST00000459128 67 ntBASIC5.06□□□□□ -1.6
TOPBP1Q92547 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.06□□□□□ -1.6
TOPBP1Q92547 RN7SKP272-201ENST00000516988 232 ntBASIC5.06□□□□□ -1.6
TOPBP1Q92547 AC009097.3-201ENST00000563557 1018 ntBASIC5.06□□□□□ -1.6
TOPBP1Q92547 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOPBP1Q92547 ASNSP3-201ENST00000451989 1306 ntBASIC5.05□□□□□ -1.6
TOPBP1Q92547 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 AL356057.1-202ENST00000402263 756 ntBASIC5.05□□□□□ -1.6
TOPBP1Q92547 AC087499.2-201ENST00000432861 149 ntBASIC5.05□□□□□ -1.6
TOPBP1Q92547 RPS12P18-201ENST00000442381 270 ntBASIC5.05□□□□□ -1.6
TOPBP1Q92547 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 DPRXP4-201ENST00000578053 568 ntBASIC5.05□□□□□ -1.6
TOPBP1Q92547 AC023389.2-201ENST00000580031 955 ntBASIC5.05□□□□□ -1.6
TOPBP1Q92547 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOPBP1Q92547 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOPBP1Q92547 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOPBP1Q92547 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOPBP1Q92547 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TOPBP1Q92547 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOPBP1Q92547 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOPBP1Q92547 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOPBP1Q92547 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOPBP1Q92547 RNU2-52P-201ENST00000410680 190 ntBASIC5.04□□□□□ -1.6
TOPBP1Q92547 AC007563.3-201ENST00000433233 371 ntBASIC5.04□□□□□ -1.6
TOPBP1Q92547 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.04□□□□□ -1.6
TOPBP1Q92547 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.04□□□□□ -1.6
TOPBP1Q92547 AC114967.1-201ENST00000504890 259 ntBASIC5.04□□□□□ -1.6
TOPBP1Q92547 MYL12AP1-201ENST00000518490 515 ntBASIC5.04□□□□□ -1.6
TOPBP1Q92547 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.04□□□□□ -1.6
TOPBP1Q92547 HMGN2P47-201ENST00000559378 272 ntBASIC5.04□□□□□ -1.6
TOPBP1Q92547 AC234778.2-201ENST00000566241 354 ntBASIC5.04□□□□□ -1.6
TOPBP1Q92547 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.04□□□□□ -1.6
TOPBP1Q92547 AL596275.2-204ENST00000641628 552 ntBASIC5.04□□□□□ -1.6
TOPBP1Q92547 AL596275.2-206ENST00000641957 626 ntBASIC5.04□□□□□ -1.6
TOPBP1Q92547 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOPBP1Q92547 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOPBP1Q92547 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOPBP1Q92547 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TOPBP1Q92547 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TOPBP1Q92547 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.03□□□□□ -1.6
TOPBP1Q92547 RSL24D1P4-201ENST00000400938 484 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 MRPL50P2-201ENST00000416821 482 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 EEF1B2P7-201ENST00000451177 676 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.03□□□□□ -1.6
TOPBP1Q92547 TRBV12-1-201ENST00000479785 344 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 AC012123.2-201ENST00000485809 248 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 AC104687.1-201ENST00000485829 412 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 PCBP2P3-201ENST00000509726 843 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 OR5G4P-201ENST00000525251 760 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 MIR4769-201ENST00000584126 77 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.03□□□□□ -1.6
TOPBP1Q92547 AC015871.2-201ENST00000603605 948 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 AL035413.2-201ENST00000604801 525 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 AL034351.1-201ENST00000605288 668 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 OR6R2P-201ENST00000609216 300 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 AL590808.1-201ENST00000618696 141 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 AC007496.3-201ENST00000624987 3443 ntBASIC5.03□□□□□ -1.6
TOPBP1Q92547 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.61
TOPBP1Q92547 RNA5SP322-201ENST00000363617 119 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 AL360182.1-201ENST00000397433 468 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 MTND2P11-201ENST00000423638 648 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 NPM1P24-201ENST00000428039 894 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 MTND2P25-201ENST00000449028 610 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 RPL31P13-201ENST00000484151 370 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TOPBP1Q92547 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TOPBP1Q92547 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TOPBP1Q92547 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TOPBP1Q92547 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TOPBP1Q92547 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 RNU6-859P-201ENST00000362728 107 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 SNORA70B-201ENST00000384210 135 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 RNU6-851P-201ENST00000384565 107 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 RPL21P40-201ENST00000428586 483 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 AC010095.1-201ENST00000443543 144 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.02□□□□□ -1.61
TOPBP1Q92547 AP002812.4-201ENST00000532139 286 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.02□□□□□ -1.61
TOPBP1Q92547 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms