Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 RPL32P23-201ENST00000397237 405 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 NCSTNP1-201ENST00000406229 144 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC009302.1-201ENST00000417147 390 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 GTF2IP23-201ENST00000423746 351 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AL117339.2-201ENST00000430475 180 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC122718.1-201ENST00000439448 744 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 RPL21P89-201ENST00000444021 467 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 RAD23BP3-201ENST00000454157 1152 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 FAM133DP-201ENST00000464802 691 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 UBA52P3-201ENST00000491303 382 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC034244.1-201ENST00000507687 207 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC008885.2-201ENST00000509506 930 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AL121834.1-201ENST00000572284 509 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC008751.2-201ENST00000597885 980 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC091488.1-201ENST00000604239 660 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AC025811.1-201ENST00000604312 472 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 USP9YP4-201ENST00000424401 1745 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 ERCC6-202ENST00000374127 1782 ntBASIC4.45□□□□□ -1.7
BEST2Q8NFU1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
BEST2Q8NFU1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 MTND4P26-201ENST00000415971 1359 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 IQCB2P-201ENST00000401788 1633 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 SNORA60-201ENST00000362396 134 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 RPL21P65-201ENST00000406094 466 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 RNU6-628P-201ENST00000410675 107 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 TPT1P2-201ENST00000413105 503 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AC007435.1-201ENST00000421086 415 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 MTCO2P20-201ENST00000437339 673 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 COX6CP18-201ENST00000448769 222 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 FGF7P3-201ENST00000454645 303 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 VN1R40P-201ENST00000455196 941 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 NECAP1P2-201ENST00000455668 727 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AC011979.1-201ENST00000472300 483 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 RPL29P14-201ENST00000495837 428 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 HMGB3P13-201ENST00000511263 607 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 IGLV3-26-201ENST00000520756 302 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AF279873.1-201ENST00000523393 313 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 MTATP6P15-201ENST00000527233 835 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AGGF1P6-201ENST00000569213 976 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AP003392.5-201ENST00000607857 415 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AC107075.1-201ENST00000613695 314 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AC105227.2-201ENST00000615075 605 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AP005264.7-201ENST00000625003 745 ntBASIC4.44□□□□□ -1.7
BEST2Q8NFU1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST2Q8NFU1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms