Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 VN1R78P-201ENST00000597393 564 ntBASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 uc_338.32-201ENST00000615087 172 ntBASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 AC138393.1-206ENST00000540997 1886 ntBASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 SNORA71.1-201ENST00000364523 117 ntBASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 OR6C64P-201ENST00000419708 825 ntBASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 AC021146.1-201ENST00000511202 716 ntBASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CFAP43Q8NDM7 AC007336.1-201ENST00000576365 3828 ntBASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 AC096644.4-201ENST00000563417 2912 ntBASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 U3.12-201ENST00000364498 214 ntBASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 LAP3P1-201ENST00000403648 294 ntBASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 RPL7P36-201ENST00000444633 681 ntBASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 SLC31A1P1-201ENST00000451221 567 ntBASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 MIR2276-201ENST00000516886 89 ntBASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 RN7SKP116-201ENST00000516902 319 ntBASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 AC010306.1-201ENST00000523223 1117 ntBASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CFAP43Q8NDM7 AC108734.1-201ENST00000439549 399 ntBASIC4.9□□□□□ -1.62
CFAP43Q8NDM7 VN1R90P-201ENST00000595717 726 ntBASIC4.9□□□□□ -1.62
CFAP43Q8NDM7 AC087241.4-201ENST00000612441 480 ntBASIC4.9□□□□□ -1.62
CFAP43Q8NDM7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CFAP43Q8NDM7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.9□□□□□ -1.63
CFAP43Q8NDM7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.9□□□□□ -1.63
CFAP43Q8NDM7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CFAP43Q8NDM7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CFAP43Q8NDM7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AC003685.2-201ENST00000422795 395 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 Y_RNA.676-201ENST00000516393 96 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AC011602.1-201ENST00000546484 331 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 HMGB1P6-201ENST00000569046 646 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AC011242.1-201ENST00000433596 1158 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 CST9LP2-201ENST00000437612 320 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AC113430.1-201ENST00000506872 718 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AP001207.2-201ENST00000519490 539 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AC091544.4-201ENST00000555268 342 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 MIR4425-201ENST00000580572 84 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 MIR7843-201ENST00000622274 79 ntBASIC4.89□□□□□ -1.63
CFAP43Q8NDM7 AP003122.5-201ENST00000527668 3766 ntBASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 RPL12P26-201ENST00000452430 487 ntBASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 AC010401.1-201ENST00000463867 348 ntBASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 RNA5SP367-201ENST00000516557 118 ntBASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 MIR622-201ENST00000638396 96 ntBASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.88□□□□□ -1.63
CFAP43Q8NDM7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 RPL30P2-201ENST00000414021 291 ntBASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 Z93242.1-201ENST00000427102 353 ntBASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 AC117440.1-201ENST00000474107 571 ntBASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 AC015849.2-201ENST00000605738 409 ntBASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 CYCSP41-201ENST00000616920 296 ntBASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 MTCO1P8-201ENST00000416914 1523 ntBASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CFAP43Q8NDM7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms