Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 COX6CP7-201ENST00000597056 208 ntBASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 AL360012.1-201ENST00000602813 131 ntBASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 AL138895.2-201ENST00000603019 178 ntBASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 uc_338.12-201ENST00000616344 181 ntBASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
UBE3DQ7Z6J8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AP002512.4-202ENST00000641599 4530 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 NLRP3P1-201ENST00000622303 1785 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 OR5P1P-201ENST00000299512 925 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 RNU6-254P-201ENST00000363377 107 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 RNY4P16-201ENST00000364768 94 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 RNU6-463P-201ENST00000384340 107 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 RPL5P18-201ENST00000406671 891 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 RPS20P5-201ENST00000434808 360 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AP000936.3-201ENST00000438127 255 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC114495.1-201ENST00000441274 436 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 CEACAMP9-201ENST00000442990 513 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 RPL23AP11-201ENST00000475260 469 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC009120.1-201ENST00000493458 473 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC060780.2-201ENST00000589047 198 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC068790.3-201ENST00000602988 553 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AL512782.1-201ENST00000603093 364 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 FAM27E4-201ENST00000605259 342 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 RNU6-89P-201ENST00000606519 100 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC103710.3-201ENST00000608157 948 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AP001521.2-201ENST00000608772 546 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AL391813.2-201ENST00000609113 322 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC040896.1-201ENST00000613819 479 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC022400.9-201ENST00000623633 273 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 AC092070.2-203ENST00000598377 3644 ntBASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBE3DQ7Z6J8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 MSL3P1-202ENST00000440028 1468 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC007842.1-201ENST00000597336 2039 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 RNU6-474P-201ENST00000384243 107 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 SNORD37.1-201ENST00000390968 65 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AL359634.1-202ENST00000404721 284 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 NDUFB4P5-201ENST00000415445 361 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 ARL5AP1-201ENST00000418991 388 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AP006222.1-205ENST00000450734 457 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 MTND3P16-201ENST00000452205 344 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 DUTP1-201ENST00000493631 470 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC114797.1-201ENST00000514003 728 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 RNA5SP271-201ENST00000516700 88 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 HAUS8P1-201ENST00000549005 542 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AL355836.1-201ENST00000555951 870 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 AC092121.1-201ENST00000569452 202 ntBASIC5.47□□□□□ -1.53
UBE3DQ7Z6J8 CYP2C61P-201ENST00000604072 290 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms