Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 OR4K7P-201ENST00000580232 945 ntBASIC4.7□□□□□ -1.66
VSTM1Q6UX27 MIR4697-201ENST00000582977 78 ntBASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AC009220.3-201ENST00000604318 586 ntBASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AL390816.3-201ENST00000604527 1066 ntBASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AC006270.3-201ENST00000605967 1036 ntBASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AP004247.3-201ENST00000608682 624 ntBASIC4.7□□□□□ -1.66
VSTM1Q6UX27 MIR6891-201ENST00000618788 93 ntBASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AC068792.1-201ENST00000621354 417 ntBASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VSTM1Q6UX27 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.7□□□□□ -1.66
VSTM1Q6UX27 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC090017.1-201ENST00000548612 1779 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 SNORA70.2-201ENST00000364506 135 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC068538.1-201ENST00000376856 336 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 Y_RNA.599-201ENST00000410489 109 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 MTCO1P21-201ENST00000416634 589 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 RPL23AP25-201ENST00000430973 463 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 CBX1P4-201ENST00000439415 457 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC114495.1-201ENST00000441274 436 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 PHBP16-201ENST00000446318 950 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 RPL7P59-201ENST00000447700 943 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 OR6C5P-201ENST00000452388 923 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 RPS27AP17-201ENST00000463344 455 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 RPS26P28-201ENST00000470806 348 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AL024509.2-201ENST00000493462 493 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC010424.1-201ENST00000506336 297 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC048346.1-201ENST00000510247 144 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 MTND3P5-201ENST00000512798 333 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 RN7SKP122-201ENST00000515923 296 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 RNU6-885P-201ENST00000516607 104 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 IGKV2-36-201ENST00000519999 223 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC060788.1-201ENST00000521318 469 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC004217.3-201ENST00000551552 878 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC136624.4-201ENST00000573044 370 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 ROCK1P1-201ENST00000573767 549 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC068790.6-201ENST00000602558 258 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC004987.4-201ENST00000603383 338 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC079587.1-201ENST00000603846 277 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC005962.2-201ENST00000611427 652 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 MLECP1-201ENST00000615893 709 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 uc_338.13-201ENST00000618243 179 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC091905.2-201ENST00000623143 306 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC016717.3-201ENST00000624730 554 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC084035.1-201ENST00000634543 607 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 SCN1A-220ENST00000641603 12506 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 NXPH1-205ENST00000602349 1953 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
VSTM1Q6UX27 AC107027.3-201ENST00000565095 3473 ntBASIC4.69□□□□□ -1.66
VSTM1Q6UX27 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VSTM1Q6UX27 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms