Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SNORA26.7-201ENST00000391288 122 ntBASIC2.54□□□□□ -2
SSBP1Q04837 RNU6-603P-201ENST00000411403 107 ntBASIC2.54□□□□□ -2
SSBP1Q04837 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.54□□□□□ -2
SSBP1Q04837 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.54□□□□□ -2
SSBP1Q04837 RPL7P2-201ENST00000427639 268 ntBASIC2.54□□□□□ -2
SSBP1Q04837 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.54□□□□□ -2
SSBP1Q04837 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.54□□□□□ -2
SSBP1Q04837 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
SSBP1Q04837 TPT1P13-201ENST00000449760 499 ntBASIC2.54□□□□□ -2
SSBP1Q04837 RPL7P31-201ENST00000450192 724 ntBASIC2.54□□□□□ -2
SSBP1Q04837 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.54□□□□□ -2
SSBP1Q04837 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSBP1Q04837 AC008571.1-201ENST00000467232 300 ntBASIC2.54□□□□□ -2
SSBP1Q04837 RPL9P33-201ENST00000484311 566 ntBASIC2.54□□□□□ -2
SSBP1Q04837 DYNLL1P6-201ENST00000503440 264 ntBASIC2.54□□□□□ -2
SSBP1Q04837 AC021678.1-201ENST00000505195 936 ntBASIC2.54□□□□□ -2
SSBP1Q04837 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.54□□□□□ -2
SSBP1Q04837 AC104619.4-201ENST00000510773 249 ntBASIC2.54□□□□□ -2
SSBP1Q04837 TRMT10BP1-201ENST00000519377 943 ntBASIC2.54□□□□□ -2
SSBP1Q04837 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC2.54□□□□□ -2
SSBP1Q04837 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.54□□□□□ -2
SSBP1Q04837 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.54□□□□□ -2
SSBP1Q04837 AC107016.2-201ENST00000547968 190 ntBASIC2.54□□□□□ -2
SSBP1Q04837 AL121839.1-201ENST00000556233 1185 ntBASIC2.54□□□□□ -2
SSBP1Q04837 RPL21P12-201ENST00000559810 515 ntBASIC2.54□□□□□ -2
SSBP1Q04837 AL157394.1-201ENST00000562983 1224 ntBASIC2.54□□□□□ -2
SSBP1Q04837 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.54□□□□□ -2
SSBP1Q04837 MIR5186-201ENST00000577504 120 ntBASIC2.54□□□□□ -2
SSBP1Q04837 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.54□□□□□ -2
SSBP1Q04837 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSBP1Q04837 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.54□□□□□ -2
SSBP1Q04837 AC105227.2-201ENST00000615075 605 ntBASIC2.54□□□□□ -2
SSBP1Q04837 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSBP1Q04837 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.54□□□□□ -2
SSBP1Q04837 C2orf27A-204ENST00000623058 969 ntBASIC2.54□□□□□ -2
SSBP1Q04837 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.54□□□□□ -2
SSBP1Q04837 AP001148.1-201ENST00000624124 2359 ntBASIC2.54□□□□□ -2
SSBP1Q04837 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.54□□□□□ -2
SSBP1Q04837 AP003122.5-201ENST00000527668 3766 ntBASIC2.53□□□□□ -2
SSBP1Q04837 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.53□□□□□ -2
SSBP1Q04837 AC092079.1-201ENST00000558620 1985 ntBASIC2.53□□□□□ -2
SSBP1Q04837 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SSBP1Q04837 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SSBP1Q04837 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SSBP1Q04837 RNU6-146P-201ENST00000384602 108 ntBASIC2.53□□□□□ -2
SSBP1Q04837 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.53□□□□□ -2
SSBP1Q04837 RPL5P18-201ENST00000406671 891 ntBASIC2.53□□□□□ -2
SSBP1Q04837 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.53□□□□□ -2
SSBP1Q04837 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.53□□□□□ -2
SSBP1Q04837 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.53□□□□□ -2
SSBP1Q04837 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.53□□□□□ -2
SSBP1Q04837 CLIC4P1-201ENST00000453177 535 ntBASIC2.53□□□□□ -2
SSBP1Q04837 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.53□□□□□ -2
SSBP1Q04837 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.53□□□□□ -2
SSBP1Q04837 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.53□□□□□ -2
SSBP1Q04837 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.53□□□□□ -2
SSBP1Q04837 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC2.53□□□□□ -2
SSBP1Q04837 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.53□□□□□ -2
SSBP1Q04837 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.53□□□□□ -2
SSBP1Q04837 SNORD116-26-201ENST00000516006 96 ntBASIC2.53□□□□□ -2
SSBP1Q04837 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.53□□□□□ -2
SSBP1Q04837 ELOCP31-201ENST00000540463 467 ntBASIC2.53□□□□□ -2
SSBP1Q04837 AC087888.1-201ENST00000550884 1254 ntBASIC2.53□□□□□ -2
SSBP1Q04837 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.53□□□□□ -2
SSBP1Q04837 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSBP1Q04837 AL031985.2-201ENST00000600955 480 ntBASIC2.53□□□□□ -2
SSBP1Q04837 AC091488.1-201ENST00000604239 660 ntBASIC2.53□□□□□ -2
SSBP1Q04837 AC092354.2-201ENST00000607786 514 ntBASIC2.53□□□□□ -2
SSBP1Q04837 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.53□□□□□ -2
SSBP1Q04837 AC004241.3-201ENST00000611728 517 ntBASIC2.53□□□□□ -2
SSBP1Q04837 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.53□□□□□ -2
SSBP1Q04837 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.53□□□□□ -2
SSBP1Q04837 AC116447.1-201ENST00000613153 453 ntBASIC2.53□□□□□ -2
SSBP1Q04837 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC2.53□□□□□ -2
SSBP1Q04837 AC002076.2-201ENST00000617362 122 ntBASIC2.53□□□□□ -2
SSBP1Q04837 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC2.53□□□□□ -2
SSBP1Q04837 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SSBP1Q04837 AC010329.2-201ENST00000595195 2737 ntBASIC2.53□□□□□ -2
SSBP1Q04837 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2.01
SSBP1Q04837 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.52□□□□□ -2.01
SSBP1Q04837 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.52□□□□□ -2.01
SSBP1Q04837 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSBP1Q04837 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSBP1Q04837 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SSBP1Q04837 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSBP1Q04837 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SSBP1Q04837 AL357075.1-201ENST00000404107 726 ntBASIC2.52□□□□□ -2.01
SSBP1Q04837 U3.42-201ENST00000408746 214 ntBASIC2.52□□□□□ -2.01
SSBP1Q04837 DPPA2P1-201ENST00000428060 556 ntBASIC2.52□□□□□ -2.01
SSBP1Q04837 RPL36AP6-201ENST00000435770 321 ntBASIC2.52□□□□□ -2.01
SSBP1Q04837 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.52□□□□□ -2.01
SSBP1Q04837 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.52□□□□□ -2.01
SSBP1Q04837 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.52□□□□□ -2.01
SSBP1Q04837 MTND6P32-201ENST00000457611 483 ntBASIC2.52□□□□□ -2.01
SSBP1Q04837 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.52□□□□□ -2.01
SSBP1Q04837 RPL7P15-201ENST00000461190 712 ntBASIC2.52□□□□□ -2.01
SSBP1Q04837 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.52□□□□□ -2.01
SSBP1Q04837 PRELID3BP6-201ENST00000503839 571 ntBASIC2.52□□□□□ -2.01
SSBP1Q04837 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.52□□□□□ -2.01
SSBP1Q04837 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms