Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LYPLA1P1-201ENST00000434514 622 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 RPL35AP21-201ENST00000437667 333 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 RPL7AP61-201ENST00000443410 636 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 GDI2P2-201ENST00000445131 608 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.58□□□□□ -1.68
SUMO3P55854 HMGB1P15-201ENST00000453854 435 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.58□□□□□ -1.68
SUMO3P55854 AC018638.3-201ENST00000461273 132 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 RN7SL177P-201ENST00000476596 299 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 COX6B1P2-201ENST00000489624 230 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 RN7SL591P-201ENST00000496150 292 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 TXNP6-201ENST00000510190 310 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 AC010625.1-201ENST00000511296 403 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SUMO3P55854 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.58□□□□□ -1.68
SUMO3P55854 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SUMO3P55854 MTCYBP20-201ENST00000524239 1129 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.58□□□□□ -1.68
SUMO3P55854 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.58□□□□□ -1.68
SUMO3P55854 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SUMO3P55854 OR11J2P-201ENST00000555298 907 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.58□□□□□ -1.68
SUMO3P55854 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.58□□□□□ -1.68
SUMO3P55854 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.58□□□□□ -1.68
SUMO3P55854 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.58□□□□□ -1.68
SUMO3P55854 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.58□□□□□ -1.68
SUMO3P55854 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.58□□□□□ -1.68
SUMO3P55854 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.58□□□□□ -1.68
SUMO3P55854 AC105254.2-201ENST00000603636 436 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 AC087783.2-201ENST00000605070 562 ntBASIC4.58□□□□□ -1.68
SUMO3P55854 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.58□□□□□ -1.68
SUMO3P55854 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.58□□□□□ -1.68
SUMO3P55854 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SUMO3P55854 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SUMO3P55854 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.58□□□□□ -1.68
SUMO3P55854 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SUMO3P55854 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SUMO3P55854 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 AC091046.3-201ENST00000631455 1574 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.57□□□□□ -1.68
SUMO3P55854 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.57□□□□□ -1.68
SUMO3P55854 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 SNORA73.1-201ENST00000363107 205 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 RNU6-744P-201ENST00000365557 107 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SUMO3P55854 RNU6-1316P-201ENST00000384242 108 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 RNU1-106P-201ENST00000384382 164 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 Y_RNA.505-201ENST00000384489 102 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 RN7SKP16-201ENST00000410180 299 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 BX510359.3-201ENST00000422168 306 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AL513174.1-201ENST00000423182 629 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 AL627308.1-201ENST00000435693 821 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 AP000542.1-201ENST00000448473 371 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AC073850.1-201ENST00000449243 255 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 RPS20P24-201ENST00000457473 361 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 RPL21P103-201ENST00000479921 488 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 RPS4XP14-201ENST00000493072 781 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 AF131216.2-201ENST00000512316 564 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.57□□□□□ -1.68
SUMO3P55854 AC004980.4-201ENST00000513375 203 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 RN7SKP66-201ENST00000516681 231 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SUMO3P55854 AC012339.2-201ENST00000523996 453 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.57□□□□□ -1.68
SUMO3P55854 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.57□□□□□ -1.68
SUMO3P55854 TVP23CP2-201ENST00000571473 623 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 AC011840.5-201ENST00000582125 771 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.57□□□□□ -1.68
SUMO3P55854 OR7E18P-201ENST00000592589 702 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AC022916.3-201ENST00000592961 742 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AC010680.4-201ENST00000605334 543 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AL353600.1-201ENST00000608148 251 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 AL596245.1-201ENST00000618994 362 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 AC084035.1-201ENST00000634543 607 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 C4BPAP1-201ENST00000415474 1893 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms