Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL163051.2-201ENST00000618976 735 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AC079684.1-201ENST00000621405 437 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.29□□□□□ -1.88
CX3CR1P49238 AC048347.1-201ENST00000624621 427 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CR1P49238 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CR1P49238 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CR1P49238 OR6C71P-202ENST00000641886 1107 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CR1P49238 AC090337.1-201ENST00000579651 2074 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CX3CR1P49238 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CR1P49238 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CR1P49238 MIR372-201ENST00000362225 67 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CX3CR1P49238 RNA5SP424-201ENST00000390988 115 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 RN7SKP285-201ENST00000410137 318 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC069218.2-201ENST00000411665 344 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AL158825.1-201ENST00000414735 521 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 MTND2P16-201ENST00000419987 799 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AC017083.1-201ENST00000428093 483 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC093422.3-201ENST00000428506 305 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CR1P49238 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AC006994.1-201ENST00000438212 839 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 RPS26P30-201ENST00000443431 335 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 SETD6P1-201ENST00000444575 317 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 MTND1P33-201ENST00000446251 917 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AC006480.1-201ENST00000449887 378 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 OR9M1P-201ENST00000459641 921 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC004801.2-202ENST00000463559 283 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.28□□□□□ -1.88
CX3CR1P49238 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 TPT1P3-201ENST00000492841 512 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 TRAV31-201ENST00000502780 342 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC026784.1-201ENST00000507986 352 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.28□□□□□ -1.88
CX3CR1P49238 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 RNU6-202P-201ENST00000515998 96 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CR1P49238 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CR1P49238 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AC017100.2-201ENST00000584628 355 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AL163642.2-201ENST00000604722 1019 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 SNORA62.6-201ENST00000606322 83 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.28□□□□□ -1.88
CX3CR1P49238 AC012467.1-201ENST00000607740 256 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CR1P49238 MIR378J-201ENST00000611988 109 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 TNPO1P3-201ENST00000436471 2662 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CR1P49238 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 PABPC1P7-201ENST00000413177 1513 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CR1P49238 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.28□□□□□ -1.88
CX3CR1P49238 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CX3CR1P49238 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CR1P49238 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CR1P49238 MTND4P21-201ENST00000453886 1357 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 USP8P1-201ENST00000494673 3183 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CR1P49238 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CX3CR1P49238 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CX3CR1P49238 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CR1P49238 RNU6-213P-201ENST00000384051 104 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 U1.1-201ENST00000384101 164 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 EIF5P1-201ENST00000400019 1231 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 UBE2V1P15-201ENST00000407776 448 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 RNU6-628P-201ENST00000410675 107 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 MTND4P22-201ENST00000413116 1169 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CR1P49238 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CR1P49238 EI24P1-201ENST00000416584 867 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 HMGB3P20-201ENST00000417997 600 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.27□□□□□ -1.89
CX3CR1P49238 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CR1P49238 RPL21P89-201ENST00000444021 467 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms