Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
BRCC3P46736 HLFP1-201ENST00000402375 499 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AC069282.1-201ENST00000411911 526 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AC245052.5-201ENST00000416320 649 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AC073310.1-201ENST00000423226 1033 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.93□□□□□ -1.78
BRCC3P46736 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC006480.1-201ENST00000449887 378 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 HMGB3P21-201ENST00000452483 547 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AC006511.1-201ENST00000470614 315 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AC010683.1-201ENST00000473673 378 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 MTND6P6-201ENST00000478031 263 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AP000926.1-201ENST00000479573 241 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 RN7SL293P-201ENST00000481765 281 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 RN7SKP13-201ENST00000515933 244 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 SNORA70.18-201ENST00000516696 98 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 IGKV2-36-201ENST00000519999 223 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AP000916.1-201ENST00000533869 835 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.93□□□□□ -1.78
BRCC3P46736 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC106734.1-201ENST00000568646 663 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC020914.4-201ENST00000597690 277 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AC133794.1-201ENST00000602731 914 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 AC010591.1-201ENST00000603941 649 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 HMGB1P50-201ENST00000605814 607 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 U6.48-201ENST00000618523 106 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 MFSD8-213ENST00000641134 1327 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRCC3P46736 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRCC3P46736 SAGE2P-201ENST00000420011 2126 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRCC3P46736 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCC3P46736 AC007529.1-201ENST00000418574 2178 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
BRCC3P46736 MTCO1P12-201ENST00000414273 1543 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 HSPA8P19-201ENST00000505359 1517 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRCC3P46736 RN7SKP44-201ENST00000363602 316 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 MIR183-201ENST00000384958 110 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 RNU2-6P-201ENST00000411404 190 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 HMGB3P31-201ENST00000413333 595 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 HIGD1AP12-201ENST00000427832 281 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC005189.1-201ENST00000431286 310 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC006994.1-201ENST00000438212 839 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.92□□□□□ -1.78
BRCC3P46736 ARL5AP2-201ENST00000444698 533 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 PRDX3P3-201ENST00000447765 522 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.92□□□□□ -1.78
BRCC3P46736 PRSS3P4-201ENST00000453323 162 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 RPL23AP71-201ENST00000470966 469 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 S100A11P1-201ENST00000477525 312 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC106872.2-201ENST00000494303 480 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC110768.1-201ENST00000509222 400 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.92□□□□□ -1.78
BRCC3P46736 AP003355.1-201ENST00000518956 587 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 SUMO2P20-201ENST00000520803 283 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC104115.2-201ENST00000523026 687 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.92□□□□□ -1.78
BRCC3P46736 AC068339.2-201ENST00000534395 618 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC104072.1-201ENST00000568817 668 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCC3P46736 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.92□□□□□ -1.78
BRCC3P46736 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCC3P46736 VN1R9P-201ENST00000614184 867 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC084757.4-201ENST00000616350 526 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC015967.1-201ENST00000619893 476 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC009269.6-201ENST00000621778 588 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AC000123.2-201ENST00000623124 461 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCC3P46736 AL392088.2-201ENST00000637607 285 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AP000553.6-201ENST00000641242 118 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCC3P46736 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRCC3P46736 AC008432.1-201ENST00000615912 1320 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 AL627171.1-201ENST00000618845 1308 ntBASIC3.92□□□□□ -1.78
BRCC3P46736 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRCC3P46736 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
BRCC3P46736 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRCC3P46736 LINC00561-201ENST00000565815 2738 ntBASIC3.91□□□□□ -1.78
BRCC3P46736 Y_RNA.333-201ENST00000365274 102 ntBASIC3.91□□□□□ -1.78
BRCC3P46736 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms