Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD40LGP29965 HMGB3P18-201ENST00000406327 590 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.24□□□□□ -1.89
CD40LGP29965 AC005517.2-201ENST00000424673 553 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.24□□□□□ -1.89
CD40LGP29965 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 HIGD1AP11-201ENST00000438361 280 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 AC009969.1-201ENST00000438726 172 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 HMGB1P48-201ENST00000446155 598 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 SSXP4-201ENST00000451349 245 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.24□□□□□ -1.89
CD40LGP29965 AC104308.1-201ENST00000454621 333 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.24□□□□□ -1.89
CD40LGP29965 RPL21P11-201ENST00000461458 483 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
CD40LGP29965 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.24□□□□□ -1.89
CD40LGP29965 RPS27AP13-201ENST00000498403 237 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.24□□□□□ -1.89
CD40LGP29965 MIR2276-201ENST00000516886 89 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 AP001207.1-201ENST00000524051 481 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.24□□□□□ -1.89
CD40LGP29965 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.24□□□□□ -1.89
CD40LGP29965 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD40LGP29965 AP003717.3-201ENST00000544832 1180 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.24□□□□□ -1.89
CD40LGP29965 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.24□□□□□ -1.89
CD40LGP29965 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.24□□□□□ -1.89
CD40LGP29965 MIR3138-201ENST00000585238 82 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CD40LGP29965 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.24□□□□□ -1.89
CD40LGP29965 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.24□□□□□ -1.89
CD40LGP29965 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CD40LGP29965 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.24□□□□□ -1.89
CD40LGP29965 AP001350.1-201ENST00000601906 1524 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.23□□□□□ -1.89
CD40LGP29965 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.23□□□□□ -1.89
CD40LGP29965 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD40LGP29965 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD40LGP29965 U3.11-201ENST00000364476 212 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD40LGP29965 AL161909.1-201ENST00000397390 712 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 HSPE1P12-201ENST00000412576 301 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.23□□□□□ -1.89
CD40LGP29965 AC012498.1-201ENST00000424037 437 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 COX6CP15-201ENST00000426313 211 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 RPL21P66-201ENST00000426566 466 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 TRIAP1P1-201ENST00000427062 225 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CD40LGP29965 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 RPS11P1-201ENST00000451072 473 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 RPS7P7-201ENST00000463499 571 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 RN7SL132P-201ENST00000478131 296 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 MTCO3P35-201ENST00000485582 781 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AC041039.1-201ENST00000485656 536 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AC110792.1-201ENST00000491826 472 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AL132838.2-201ENST00000492041 314 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.23□□□□□ -1.89
CD40LGP29965 AC025674.1-201ENST00000507074 324 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 AC108064.1-201ENST00000513791 460 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 RN7SKP122-201ENST00000515923 296 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 OR8G5-201ENST00000524943 1041 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CD40LGP29965 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.23□□□□□ -1.89
CD40LGP29965 AL121766.1-201ENST00000547436 487 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.23□□□□□ -1.89
CD40LGP29965 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.23□□□□□ -1.89
CD40LGP29965 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40LGP29965 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AC005962.2-201ENST00000611427 652 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AL445567.2-201ENST00000618935 498 ntBASIC3.23□□□□□ -1.89
CD40LGP29965 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.23□□□□□ -1.89
CD40LGP29965 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.23□□□□□ -1.89
CD40LGP29965 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD40LGP29965 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CD40LGP29965 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CD40LGP29965 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CD40LGP29965 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 SNORA70.2-201ENST00000364506 135 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CD40LGP29965 AL022722.2-201ENST00000402519 180 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 MTATP6P31-201ENST00000406985 692 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 RNU6-628P-201ENST00000410675 107 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 Y_RNA.625-201ENST00000411256 107 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 RAB28P1-201ENST00000411517 641 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.22□□□□□ -1.89
CD40LGP29965 AC068533.1-201ENST00000418542 415 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 TOMM22P1-201ENST00000418578 312 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 MTCYBP24-201ENST00000420387 1106 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 RNF19BPX-201ENST00000426224 625 ntBASIC3.22□□□□□ -1.89
CD40LGP29965 RPL37P1-201ENST00000432310 284 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms