Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL136964.1-201ENST00000622038 2990 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 AC000123.2-201ENST00000623124 461 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.91□□□□□ -1.94
COL8A2P25067 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.91□□□□□ -1.94
COL8A2P25067 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
COL8A2P25067 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
COL8A2P25067 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A2P25067 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A2P25067 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A2P25067 AL133383.2-201ENST00000622958 2336 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A2P25067 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL8A2P25067 NMD3P1-201ENST00000439704 1488 ntBASIC2.9□□□□□ -1.94
COL8A2P25067 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
COL8A2P25067 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL8A2P25067 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.94
COL8A2P25067 HSPA8P19-201ENST00000505359 1517 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL8A2P25067 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL8A2P25067 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
COL8A2P25067 AC010329.2-201ENST00000595195 2737 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
COL8A2P25067 RNA5SP120-201ENST00000410900 112 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.9□□□□□ -1.95
COL8A2P25067 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.9□□□□□ -1.95
COL8A2P25067 AC114814.2-201ENST00000419195 485 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 OSTCP5-201ENST00000425293 453 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.9□□□□□ -1.95
COL8A2P25067 AC005300.1-201ENST00000428401 373 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 MTCO1P57-201ENST00000432182 261 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.9□□□□□ -1.95
COL8A2P25067 AC005019.1-201ENST00000436455 431 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.9□□□□□ -1.95
COL8A2P25067 RPS3AP12-201ENST00000443616 753 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.9□□□□□ -1.95
COL8A2P25067 AC005229.2-201ENST00000456995 399 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 RN7SL594P-201ENST00000470590 287 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC087385.1-201ENST00000475062 312 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 MTND6P6-201ENST00000478031 263 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC093663.1-201ENST00000497190 394 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.9□□□□□ -1.95
COL8A2P25067 SNORA70.24-201ENST00000517233 118 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC104997.1-201ENST00000519761 717 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 HIGD1AP18-201ENST00000520730 278 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AP000926.4-201ENST00000527351 454 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.9□□□□□ -1.95
COL8A2P25067 AC026333.2-201ENST00000542164 106 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 DUXAP6-201ENST00000553858 601 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 SNRPGP1-201ENST00000553864 222 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.9□□□□□ -1.95
COL8A2P25067 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.9□□□□□ -1.95
COL8A2P25067 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.9□□□□□ -1.95
COL8A2P25067 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.9□□□□□ -1.95
COL8A2P25067 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.9□□□□□ -1.95
COL8A2P25067 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.9□□□□□ -1.95
COL8A2P25067 AC083899.3-201ENST00000603413 594 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.9□□□□□ -1.95
COL8A2P25067 HMGB1P51-201ENST00000605166 638 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 KATNBL1P1-201ENST00000605192 748 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC015802.5-201ENST00000607478 399 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AL021368.1-201ENST00000607490 540 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AL442067.2-201ENST00000614033 363 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
COL8A2P25067 C2orf27A-204ENST00000623058 969 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC007342.8-201ENST00000623278 678 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 AC119674.1-212ENST00000641155 993 ntBASIC2.9□□□□□ -1.95
COL8A2P25067 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.9□□□□□ -1.95
COL8A2P25067 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.9□□□□□ -1.95
COL8A2P25067 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL8A2P25067 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
COL8A2P25067 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
COL8A2P25067 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
COL8A2P25067 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
COL8A2P25067 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
COL8A2P25067 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL8A2P25067 AL589826.1-201ENST00000340697 249 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
COL8A2P25067 SNORA9-201ENST00000384215 133 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
COL8A2P25067 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.89□□□□□ -1.95
COL8A2P25067 RPF2P1-201ENST00000424137 906 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 AL138785.1-201ENST00000425821 331 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.89□□□□□ -1.95
COL8A2P25067 RPL23AP83-201ENST00000434984 473 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.89□□□□□ -1.95
COL8A2P25067 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.89□□□□□ -1.95
COL8A2P25067 BTBD7P2-201ENST00000441962 620 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 AL353898.1-201ENST00000444055 238 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL8A2P25067 RN7SL601P-201ENST00000471221 293 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 AL049830.2-201ENST00000480072 201 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 AC073522.1-201ENST00000483312 377 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 AC026427.2-201ENST00000506228 536 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COL8A2P25067 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.89□□□□□ -1.95
COL8A2P25067 AC021146.1-201ENST00000511202 716 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.89□□□□□ -1.95
COL8A2P25067 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.89□□□□□ -1.95
COL8A2P25067 AC087272.1-201ENST00000523624 533 ntBASIC2.89□□□□□ -1.95
COL8A2P25067 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms