Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 Y_RNA.717-201ENST00000517106 92 ntBASIC5.63□□□□□ -1.51
ATF3P18847 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF3P18847 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF3P18847 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.63□□□□□ -1.51
ATF3P18847 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF3P18847 AC090695.1-201ENST00000561269 1222 ntBASIC5.63□□□□□ -1.51
ATF3P18847 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.63□□□□□ -1.51
ATF3P18847 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
ATF3P18847 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.63□□□□□ -1.51
ATF3P18847 AC022069.1-201ENST00000582910 658 ntBASIC5.63□□□□□ -1.51
ATF3P18847 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF3P18847 AC113368.1-201ENST00000603736 382 ntBASIC5.63□□□□□ -1.51
ATF3P18847 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF3P18847 AC140725.3-201ENST00000616193 880 ntBASIC5.63□□□□□ -1.51
ATF3P18847 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.63□□□□□ -1.51
ATF3P18847 AC013470.4-201ENST00000619978 986 ntBASIC5.63□□□□□ -1.51
ATF3P18847 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.63□□□□□ -1.51
ATF3P18847 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ATF3P18847 MTND4P8-201ENST00000514997 1362 ntBASIC5.63□□□□□ -1.51
ATF3P18847 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.63□□□□□ -1.51
ATF3P18847 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATF3P18847 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF3P18847 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ATF3P18847 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATF3P18847 ASNSP1-201ENST00000518311 1939 ntBASIC5.62□□□□□ -1.51
ATF3P18847 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATF3P18847 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF3P18847 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATF3P18847 RNA5SP391-201ENST00000363456 119 ntBASIC5.62□□□□□ -1.51
ATF3P18847 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF3P18847 RNU6-1242P-201ENST00000391052 103 ntBASIC5.62□□□□□ -1.51
ATF3P18847 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF3P18847 AL512430.2-201ENST00000406786 339 ntBASIC5.62□□□□□ -1.51
ATF3P18847 AC004022.2-201ENST00000413824 193 ntBASIC5.62□□□□□ -1.51
ATF3P18847 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF3P18847 Z93242.1-201ENST00000427102 353 ntBASIC5.62□□□□□ -1.51
ATF3P18847 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF3P18847 HSPD1P21-201ENST00000436541 245 ntBASIC5.62□□□□□ -1.51
ATF3P18847 USP9YP22-201ENST00000438971 294 ntBASIC5.62□□□□□ -1.51
ATF3P18847 AC092393.1-201ENST00000439625 742 ntBASIC5.62□□□□□ -1.51
ATF3P18847 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF3P18847 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.62□□□□□ -1.51
ATF3P18847 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF3P18847 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF3P18847 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF3P18847 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF3P18847 WBP1LP4-201ENST00000505043 344 ntBASIC5.62□□□□□ -1.51
ATF3P18847 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF3P18847 AC114322.1-201ENST00000506771 926 ntBASIC5.62□□□□□ -1.51
ATF3P18847 HMGN1P11-201ENST00000508668 303 ntBASIC5.62□□□□□ -1.51
ATF3P18847 KRT19P6-201ENST00000510983 209 ntBASIC5.62□□□□□ -1.51
ATF3P18847 AC119751.5-201ENST00000514077 770 ntBASIC5.62□□□□□ -1.51
ATF3P18847 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF3P18847 AC091516.1-201ENST00000549191 703 ntBASIC5.62□□□□□ -1.51
ATF3P18847 AC107016.1-201ENST00000550463 337 ntBASIC5.62□□□□□ -1.51
ATF3P18847 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.62□□□□□ -1.51
ATF3P18847 AADACP1-206ENST00000561502 1193 ntBASIC5.62□□□□□ -1.51
ATF3P18847 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
ATF3P18847 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATF3P18847 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATF3P18847 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF3P18847 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF3P18847 RNU4-28P-201ENST00000364739 141 ntBASIC5.61□□□□□ -1.51
ATF3P18847 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.61□□□□□ -1.51
ATF3P18847 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ATF3P18847 SNORD65.1-201ENST00000390889 71 ntBASIC5.61□□□□□ -1.51
ATF3P18847 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ATF3P18847 AL078604.1-201ENST00000404609 466 ntBASIC5.61□□□□□ -1.51
ATF3P18847 BOLA3P4-201ENST00000418151 400 ntBASIC5.61□□□□□ -1.51
ATF3P18847 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF3P18847 AC233981.1-201ENST00000423224 461 ntBASIC5.61□□□□□ -1.51
ATF3P18847 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF3P18847 AC004022.1-201ENST00000447766 1066 ntBASIC5.61□□□□□ -1.51
ATF3P18847 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.61□□□□□ -1.51
ATF3P18847 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.61□□□□□ -1.51
ATF3P18847 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.61□□□□□ -1.51
ATF3P18847 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.61□□□□□ -1.51
ATF3P18847 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.61□□□□□ -1.51
ATF3P18847 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF3P18847 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF3P18847 UBE2CP3-201ENST00000502715 450 ntBASIC5.61□□□□□ -1.51
ATF3P18847 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF3P18847 AC011352.3-201ENST00000505162 593 ntBASIC5.61□□□□□ -1.51
ATF3P18847 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATF3P18847 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.61□□□□□ -1.51
ATF3P18847 DCAF13P3-201ENST00000561147 1334 ntBASIC5.61□□□□□ -1.51
ATF3P18847 AC025627.2-201ENST00000576220 160 ntBASIC5.61□□□□□ -1.51
ATF3P18847 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.61□□□□□ -1.51
ATF3P18847 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.61□□□□□ -1.51
ATF3P18847 AL049634.3-201ENST00000604968 457 ntBASIC5.61□□□□□ -1.51
ATF3P18847 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.61□□□□□ -1.51
ATF3P18847 AC107081.3-201ENST00000612715 2034 ntBASIC5.61□□□□□ -1.51
ATF3P18847 AC006927.4-201ENST00000639187 543 ntBASIC5.61□□□□□ -1.51
ATF3P18847 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF3P18847 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms