Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ELOCP6-201ENST00000429066 328 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 RPL36P19-201ENST00000430744 301 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 MRPL50P1-201ENST00000431951 384 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 MRPS18BP2-201ENST00000434310 759 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 HSFY3P-201ENST00000444242 1191 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 RPL6P5-201ENST00000445678 828 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AL929288.2-201ENST00000446368 407 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC099563.1-201ENST00000456086 418 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 GTF2IP12-201ENST00000456547 356 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 RPS4XP2-201ENST00000458402 793 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 ELOCP12-201ENST00000458706 328 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 RN7SL330P-201ENST00000469709 307 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 NDUFA5P9-201ENST00000472609 340 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 RPS4XP6-201ENST00000477670 797 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 FCF1P3-201ENST00000496394 590 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 TRAV31-201ENST00000502780 342 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC021146.5-201ENST00000503544 545 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC108475.1-201ENST00000507880 950 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 FABP5P12-201ENST00000515543 389 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 RNU6-416P-201ENST00000516265 103 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 MTND5P21-201ENST00000531961 522 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC006518.1-201ENST00000541449 943 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC004217.3-201ENST00000551552 878 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 SERPINE4P-201ENST00000554978 281 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 EIF5A2P1-201ENST00000564027 460 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC023575.1-201ENST00000580510 358 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC008745.1-201ENST00000604064 271 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC092653.1-201ENST00000608509 531 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC106730.3-201ENST00000624568 641 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 SEPT7P7-201ENST00000420492 1301 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 RNA5SP399-201ENST00000364003 117 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 RPL22P22-201ENST00000395439 379 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 SNORA11B-201ENST00000408175 129 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 RNU6-77P-201ENST00000410554 91 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 RNA5SP31-201ENST00000411144 127 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 RNA5SP107-201ENST00000411358 122 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 DEFB130D-201ENST00000426866 237 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 COX6B1P7-201ENST00000430845 235 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AL512637.2-201ENST00000431287 1256 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 USP9YP31-201ENST00000431405 881 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AL096829.2-201ENST00000446582 742 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 RPS3AP46-201ENST00000448352 682 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 BX248409.1-201ENST00000455497 255 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 RPL23AP62-201ENST00000463396 453 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC008379.1-201ENST00000463655 464 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AP000873.1-201ENST00000463987 400 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 UQCRHP4-201ENST00000471686 272 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 SNORA26.10-201ENST00000516427 141 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 SNORA31.9-201ENST00000516429 84 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 RNA5SP49-201ENST00000516450 115 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC138701.1-201ENST00000524329 714 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC091516.1-201ENST00000549191 703 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 TRAV37-201ENST00000553906 342 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 PSMB7P1-201ENST00000556349 514 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC037471.2-201ENST00000564941 598 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms