Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL109741.2-201ENST00000455561 343 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKNO60260 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKNO60260 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKNO60260 RPL7P19-201ENST00000469948 618 ntBASIC3.93□□□□□ -1.78
PRKNO60260 RPS29P19-201ENST00000479709 171 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC126121.1-201ENST00000482313 553 ntBASIC3.93□□□□□ -1.78
PRKNO60260 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKNO60260 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 WBP1LP4-201ENST00000505043 344 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC104090.1-201ENST00000506341 1171 ntBASIC3.93□□□□□ -1.78
PRKNO60260 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKNO60260 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 MTCYBP16-201ENST00000509187 1129 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKNO60260 KCTD9P2-201ENST00000512203 1013 ntBASIC3.93□□□□□ -1.78
PRKNO60260 RNA5SP360-201ENST00000516555 118 ntBASIC3.93□□□□□ -1.78
PRKNO60260 RNU6-885P-201ENST00000516607 104 ntBASIC3.93□□□□□ -1.78
PRKNO60260 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.93□□□□□ -1.78
PRKNO60260 AC005832.3-201ENST00000537929 631 ntBASIC3.93□□□□□ -1.78
PRKNO60260 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.93□□□□□ -1.78
PRKNO60260 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKNO60260 AC125611.1-201ENST00000549563 229 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKNO60260 GTF2IP8-201ENST00000560687 584 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC090888.1-201ENST00000561335 1141 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKNO60260 AC090312.1-201ENST00000580637 348 ntBASIC3.93□□□□□ -1.78
PRKNO60260 PIGPP4-201ENST00000584447 307 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC040904.1-201ENST00000590850 223 ntBASIC3.93□□□□□ -1.78
PRKNO60260 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKNO60260 AC006539.2-201ENST00000601729 572 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC020910.2-201ENST00000603635 610 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC091488.1-201ENST00000604239 660 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC121247.2-201ENST00000604776 136 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC064807.4-201ENST00000607201 407 ntBASIC3.93□□□□□ -1.78
PRKNO60260 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.93□□□□□ -1.78
PRKNO60260 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 AC069209.1-201ENST00000619282 651 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC068831.8-201ENST00000620171 435 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PRKNO60260 AC019278.1-201ENST00000623516 479 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC010608.2-201ENST00000624830 470 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.93□□□□□ -1.78
PRKNO60260 AC007671.2-201ENST00000637344 619 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AL596275.2-204ENST00000641628 552 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AL596275.2-206ENST00000641957 626 ntBASIC3.93□□□□□ -1.78
PRKNO60260 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.93□□□□□ -1.78
PRKNO60260 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.92□□□□□ -1.78
PRKNO60260 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
PRKNO60260 MTND5P31-201ENST00000419366 1374 ntBASIC3.92□□□□□ -1.78
PRKNO60260 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.92□□□□□ -1.78
PRKNO60260 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PRKNO60260 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PRKNO60260 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 IL6STP1-201ENST00000346911 1020 ntBASIC3.92□□□□□ -1.78
PRKNO60260 Y_RNA.408-201ENST00000383987 102 ntBASIC3.92□□□□□ -1.78
PRKNO60260 HDGFP1-201ENST00000405943 252 ntBASIC3.92□□□□□ -1.78
PRKNO60260 VN1R8P-201ENST00000407739 893 ntBASIC3.92□□□□□ -1.78
PRKNO60260 RNU2-42P-201ENST00000410697 113 ntBASIC3.92□□□□□ -1.78
PRKNO60260 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.92□□□□□ -1.78
PRKNO60260 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AL161631.1-201ENST00000417933 486 ntBASIC3.92□□□□□ -1.78
PRKNO60260 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.92□□□□□ -1.78
PRKNO60260 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.92□□□□□ -1.78
PRKNO60260 EIF1P3-201ENST00000423841 334 ntBASIC3.92□□□□□ -1.78
PRKNO60260 MTND4P20-201ENST00000424125 869 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.92□□□□□ -1.78
PRKNO60260 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.92□□□□□ -1.78
PRKNO60260 AL132765.1-201ENST00000434165 553 ntBASIC3.92□□□□□ -1.78
PRKNO60260 MTND4P32-201ENST00000437189 1237 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AL354941.1-201ENST00000438600 464 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.92□□□□□ -1.78
PRKNO60260 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.92□□□□□ -1.78
PRKNO60260 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 PNPLA4P1-201ENST00000458328 305 ntBASIC3.92□□□□□ -1.78
PRKNO60260 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 RPL7P18-201ENST00000478965 734 ntBASIC3.92□□□□□ -1.78
PRKNO60260 LINC00888-204ENST00000487386 421 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AC108145.1-201ENST00000503770 153 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AL592156.1-201ENST00000508758 304 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AC008885.2-201ENST00000509506 930 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AC010587.2-201ENST00000511727 448 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AC109445.1-201ENST00000512356 383 ntBASIC3.92□□□□□ -1.78
PRKNO60260 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PRKNO60260 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms