Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX4O60224 FER-202ENST00000438717 1531 ntTSL 2 BASIC4□□□□□ -1.77
SSX4O60224 AC107982.1-201ENST00000507171 1300 ntBASIC4□□□□□ -1.77
SSX4O60224 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4□□□□□ -1.77
SSX4O60224 AL136164.3-201ENST00000624429 3978 ntBASIC4□□□□□ -1.77
SSX4O60224 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4□□□□□ -1.77
SSX4O60224 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSX4O60224 FAM3C2-201ENST00000312214 681 ntBASIC4□□□□□ -1.77
SSX4O60224 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
SSX4O60224 RNU6-1226P-201ENST00000384317 107 ntBASIC4□□□□□ -1.77
SSX4O60224 ENSAP1-201ENST00000392855 326 ntBASIC4□□□□□ -1.77
SSX4O60224 AL008987.1-201ENST00000415528 237 ntBASIC4□□□□□ -1.77
SSX4O60224 UQCRBP1-201ENST00000421129 336 ntBASIC4□□□□□ -1.77
SSX4O60224 VDAC1P6-201ENST00000430062 855 ntBASIC4□□□□□ -1.77
SSX4O60224 ATP5F1P1-201ENST00000433775 569 ntBASIC4□□□□□ -1.77
SSX4O60224 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4□□□□□ -1.77
SSX4O60224 MTCO2P25-201ENST00000447065 681 ntBASIC4□□□□□ -1.77
SSX4O60224 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4□□□□□ -1.77
SSX4O60224 HMGB3P22-202ENST00000451823 572 ntBASIC4□□□□□ -1.77
SSX4O60224 BX276092.4-201ENST00000452056 248 ntBASIC4□□□□□ -1.77
SSX4O60224 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4□□□□□ -1.77
SSX4O60224 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4□□□□□ -1.77
SSX4O60224 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4□□□□□ -1.77
SSX4O60224 AC013828.1-201ENST00000481845 158 ntBASIC4□□□□□ -1.77
SSX4O60224 AC021146.5-201ENST00000503544 545 ntBASIC4□□□□□ -1.77
SSX4O60224 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4□□□□□ -1.77
SSX4O60224 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSX4O60224 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4□□□□□ -1.77
SSX4O60224 MTCO1P30-201ENST00000515244 580 ntBASIC4□□□□□ -1.77
SSX4O60224 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4□□□□□ -1.77
SSX4O60224 AC090281.1-201ENST00000523019 276 ntBASIC4□□□□□ -1.77
SSX4O60224 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4□□□□□ -1.77
SSX4O60224 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SSX4O60224 AP000619.3-201ENST00000535634 1127 ntBASIC4□□□□□ -1.77
SSX4O60224 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SSX4O60224 AC023050.2-201ENST00000544968 387 ntBASIC4□□□□□ -1.77
SSX4O60224 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4□□□□□ -1.77
SSX4O60224 AC090502.2-201ENST00000549267 280 ntBASIC4□□□□□ -1.77
SSX4O60224 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4□□□□□ -1.77
SSX4O60224 NBEAP1-201ENST00000554452 979 ntBASIC4□□□□□ -1.77
SSX4O60224 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4□□□□□ -1.77
SSX4O60224 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4□□□□□ -1.77
SSX4O60224 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4□□□□□ -1.77
SSX4O60224 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4□□□□□ -1.77
SSX4O60224 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4□□□□□ -1.77
SSX4O60224 AC012603.1-201ENST00000606424 528 ntBASIC4□□□□□ -1.77
SSX4O60224 AC080013.3-201ENST00000606839 578 ntBASIC4□□□□□ -1.77
SSX4O60224 AP002360.3-201ENST00000607673 710 ntBASIC4□□□□□ -1.77
SSX4O60224 OR6R2P-201ENST00000609216 300 ntBASIC4□□□□□ -1.77
SSX4O60224 AC021755.4-201ENST00000616620 456 ntBASIC4□□□□□ -1.77
SSX4O60224 AL049536.1-201ENST00000625043 744 ntBASIC4□□□□□ -1.77
SSX4O60224 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4□□□□□ -1.77
SSX4O60224 EED-206ENST00000527888 1422 ntTSL 2 BASIC4□□□□□ -1.77
SSX4O60224 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSX4O60224 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSX4O60224 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4□□□□□ -1.77
SSX4O60224 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SSX4O60224 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4□□□□□ -1.77
SSX4O60224 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SSX4O60224 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX4O60224 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SSX4O60224 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX4O60224 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.99□□□□□ -1.77
SSX4O60224 OR11H5P-202ENST00000641612 1325 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AL592148.3-201ENST00000608771 2646 ntBASIC3.99□□□□□ -1.77
SSX4O60224 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSX4O60224 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX4O60224 AC108467.2-201ENST00000617640 1597 ntBASIC3.99□□□□□ -1.77
SSX4O60224 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX4O60224 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX4O60224 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SSX4O60224 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX4O60224 RNU6-657P-201ENST00000383904 107 ntBASIC3.99□□□□□ -1.77
SSX4O60224 RNU1-44P-201ENST00000384453 163 ntBASIC3.99□□□□□ -1.77
SSX4O60224 RNA5SP397-201ENST00000391323 118 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX4O60224 AC140479.3-201ENST00000418944 1126 ntBASIC3.99□□□□□ -1.77
SSX4O60224 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX4O60224 CHIAP3-201ENST00000423668 1133 ntBASIC3.99□□□□□ -1.77
SSX4O60224 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX4O60224 RPEP3-201ENST00000425462 676 ntBASIC3.99□□□□□ -1.77
SSX4O60224 USP9YP11-201ENST00000427537 717 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX4O60224 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX4O60224 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX4O60224 Z77249.1-201ENST00000444622 1175 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX4O60224 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX4O60224 RPL21P134-201ENST00000453468 483 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AL139824.2-201ENST00000458731 1095 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC010301.1-201ENST00000473936 355 ntBASIC3.99□□□□□ -1.77
SSX4O60224 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX4O60224 AC034244.1-201ENST00000507687 207 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC104057.1-201ENST00000515547 497 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC026407.1-201ENST00000518369 204 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX4O60224 IGLVIV-53-201ENST00000520107 367 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC023538.1-201ENST00000534576 736 ntBASIC3.99□□□□□ -1.77
SSX4O60224 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SSX4O60224 AC010198.2-201ENST00000550612 259 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms