Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRTM2O43300 TMED11P-201ENST00000479478 690 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC104164.2-201ENST00000496953 495 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRTM2O43300 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRTM2O43300 NDUFB4P9-201ENST00000511646 388 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM2O43300 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRTM2O43300 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 RN7SKP283-201ENST00000517197 270 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRTM2O43300 MTND1P6-201ENST00000523621 946 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM2O43300 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.8□□□□□ -1.8
LRRTM2O43300 AC107982.3-201ENST00000584957 985 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC011492.1-201ENST00000600023 315 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 NTAN1P1-201ENST00000603150 646 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC112230.1-201ENST00000604342 547 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRTM2O43300 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM2O43300 AL356118.1-201ENST00000635272 1078 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRTM2O43300 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM2O43300 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM2O43300 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LRRTM2O43300 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM2O43300 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LRRTM2O43300 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM2O43300 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRTM2O43300 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRTM2O43300 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM2O43300 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM2O43300 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM2O43300 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRRTM2O43300 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
LRRTM2O43300 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM2O43300 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRTM2O43300 SNORA63.1-201ENST00000362493 131 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 RNU6-1293P-201ENST00000384077 107 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 MIR7-3-201ENST00000384898 110 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 RNU11-4P-201ENST00000391149 133 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM2O43300 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
LRRTM2O43300 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRTM2O43300 AL355615.1-201ENST00000406187 641 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 RNU2-21P-201ENST00000410368 188 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 RN7SKP56-201ENST00000410513 331 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRTM2O43300 AL161631.1-201ENST00000417933 486 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 PTP4A1P5-201ENST00000420305 455 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AC241520.1-201ENST00000422654 1099 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.79□□□□□ -1.8
LRRTM2O43300 EIF1P3-201ENST00000423841 334 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRTM2O43300 CKS1BP5-201ENST00000434172 273 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM2O43300 AL356276.2-201ENST00000435919 558 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 HMGB1P16-201ENST00000447155 540 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AC092685.1-201ENST00000447960 1243 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRTM2O43300 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRTM2O43300 ANP32BP2-201ENST00000454525 545 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 snoU13.24-201ENST00000458998 104 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AC078918.1-201ENST00000498515 228 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 CAB39P1-201ENST00000502277 460 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AC069306.1-201ENST00000507006 843 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 SNORA70.14-201ENST00000516205 110 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AC008802.1-201ENST00000519121 791 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRTM2O43300 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM2O43300 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRTM2O43300 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AC008507.2-201ENST00000588402 1176 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRTM2O43300 RNU6-156P-201ENST00000621869 107 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 AL359715.5-201ENST00000623431 443 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRTM2O43300 AC004808.1-201ENST00000627671 721 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRTM2O43300 U6.107-201ENST00000637108 79 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LRRTM2O43300 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LRRTM2O43300 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM2O43300 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
LRRTM2O43300 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
LRRTM2O43300 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
LRRTM2O43300 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRTM2O43300 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LRRTM2O43300 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LRRTM2O43300 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM2O43300 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRTM2O43300 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM2O43300 CASC19-261ENST00000641853 1638 ntBASIC3.78□□□□□ -1.8
LRRTM2O43300 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM2O43300 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRTM2O43300 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LRRTM2O43300 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM2O43300 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms