Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX1O00570 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
SOX1O00570 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
SOX1O00570 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 PABPC1P8-201ENST00000452851 2086 ntBASIC5.97□□□□□ -1.45
SOX1O00570 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 AL049780.3-201ENST00000624612 1583 ntBASIC5.97□□□□□ -1.45
SOX1O00570 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SOX1O00570 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX1O00570 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SOX1O00570 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SOX1O00570 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SOX1O00570 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SOX1O00570 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SOX1O00570 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SOX1O00570 TCP11X1-202ENST00000622971 1372 ntBASIC5.96□□□□□ -1.45
SOX1O00570 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SOX1O00570 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX1O00570 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX1O00570 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX1O00570 RNY1P12-201ENST00000364251 105 ntBASIC5.96□□□□□ -1.46
SOX1O00570 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX1O00570 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX1O00570 AC073136.2-201ENST00000417282 849 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX1O00570 AC019097.1-201ENST00000424783 735 ntBASIC5.96□□□□□ -1.46
SOX1O00570 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX1O00570 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX1O00570 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX1O00570 AC092647.2-201ENST00000452998 253 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AC026410.2-201ENST00000460281 156 ntBASIC5.96□□□□□ -1.46
SOX1O00570 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX1O00570 MRPS17P3-201ENST00000465453 385 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AC104563.1-201ENST00000476147 376 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AC034222.1-201ENST00000494052 532 ntBASIC5.96□□□□□ -1.46
SOX1O00570 FTH1P8-201ENST00000498161 514 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.96□□□□□ -1.46
SOX1O00570 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX1O00570 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX1O00570 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX1O00570 AC104986.1-201ENST00000517978 436 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AC123904.2-201ENST00000548059 300 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX1O00570 EDDM3DP-201ENST00000554692 434 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX1O00570 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX1O00570 MIR3118-1-201ENST00000581787 76 ntBASIC5.96□□□□□ -1.46
SOX1O00570 MIR4737-201ENST00000583979 81 ntBASIC5.96□□□□□ -1.46
SOX1O00570 MAGOH2P-202ENST00000584384 429 ntBASIC5.96□□□□□ -1.46
SOX1O00570 SNORD39.3-201ENST00000584451 71 ntBASIC5.96□□□□□ -1.46
SOX1O00570 Z84480.1-201ENST00000605131 311 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AL158196.1-201ENST00000616786 434 ntBASIC5.96□□□□□ -1.46
SOX1O00570 U1.31-201ENST00000620022 160 ntBASIC5.96□□□□□ -1.46
SOX1O00570 AC135068.12-201ENST00000637370 931 ntBASIC5.96□□□□□ -1.46
SOX1O00570 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX1O00570 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX1O00570 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SOX1O00570 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX1O00570 AC232271.1-201ENST00000602455 2715 ntBASIC5.96□□□□□ -1.46
SOX1O00570 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX1O00570 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX1O00570 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX1O00570 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX1O00570 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SOX1O00570 RIOK3P1-201ENST00000418778 1528 ntBASIC5.95□□□□□ -1.46
SOX1O00570 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SOX1O00570 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX1O00570 AC116158.1-201ENST00000560231 2129 ntBASIC5.95□□□□□ -1.46
SOX1O00570 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX1O00570 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX1O00570 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX1O00570 SNURFL-201ENST00000309296 343 ntBASIC5.95□□□□□ -1.46
SOX1O00570 Y_RNA.184-201ENST00000363884 108 ntBASIC5.95□□□□□ -1.46
SOX1O00570 RNU6-169P-201ENST00000365336 107 ntBASIC5.95□□□□□ -1.46
SOX1O00570 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX1O00570 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SOX1O00570 DHFRP6-201ENST00000401776 268 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AL136116.1-201ENST00000403591 381 ntBASIC5.95□□□□□ -1.46
SOX1O00570 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SOX1O00570 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.95□□□□□ -1.46
SOX1O00570 RNU2-9P-201ENST00000410194 145 ntBASIC5.95□□□□□ -1.46
SOX1O00570 GJA6P-201ENST00000415117 1042 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AC234782.4-201ENST00000417646 1048 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AC069213.2-201ENST00000420238 366 ntBASIC5.95□□□□□ -1.46
SOX1O00570 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SOX1O00570 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX1O00570 GTF2IP13-201ENST00000438487 386 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX1O00570 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX1O00570 AL035551.1-201ENST00000446931 348 ntBASIC5.95□□□□□ -1.46
SOX1O00570 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX1O00570 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX1O00570 MTND5P16-201ENST00000460269 1703 ntBASIC5.95□□□□□ -1.46
SOX1O00570 RPL7P22-201ENST00000466005 733 ntBASIC5.95□□□□□ -1.46
SOX1O00570 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX1O00570 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms