Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AP003122.5-201ENST00000527668 3766 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AL592148.3-201ENST00000608771 2646 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 OSBPL9P4-201ENST00000371707 1800 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 PABPC1P6-201ENST00000445594 1829 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 NACA3P-201ENST00000359690 648 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 CGA-201ENST00000369582 729 ntTSL 5 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RNU6-1027P-201ENST00000383998 107 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RNU1-106P-201ENST00000384382 164 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AL049697.2-201ENST00000403708 294 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 ZSCAN12P1-201ENST00000406489 419 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SKP229-201ENST00000410465 302 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SKP213-201ENST00000410746 298 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC011933.1-201ENST00000413334 321 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL23AP38-201ENST00000423801 469 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC097713.2-201ENST00000430199 356 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 LSM1P1-201ENST00000438629 273 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC006466.1-201ENST00000438721 289 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 HSFY3P-201ENST00000444242 1191 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 OR51B8P-201ENST00000449892 769 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 Z99714.1-201ENST00000450463 807 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC116533.1-201ENST00000459748 321 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AP000852.1-201ENST00000472460 573 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SL629P-201ENST00000489622 285 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 OR2A20P-203ENST00000498397 1268 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 HMGB1P22-201ENST00000505315 124 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC009901.1-201ENST00000506703 541 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC010625.1-201ENST00000511296 403 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SKP43-201ENST00000516173 320 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RNA5SP367-201ENST00000516557 118 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SKP183-201ENST00000517169 324 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AP001207.2-201ENST00000519490 539 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC087373.1-201ENST00000524920 491 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 IGKV2OR2-8-201ENST00000558710 300 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC015917.1-201ENST00000579654 510 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AL133507.1-201ENST00000605269 557 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC024560.3-201ENST00000608482 349 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AL110115.1-201ENST00000614396 364 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC068870.2-201ENST00000620635 389 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC002064.3-201ENST00000623448 346 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 AC073530.2-201ENST00000623987 261 ntBASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC1.78□□□□□ -2.12
CHKB-CPT1BH3BT56 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.78□□□□□ -2.13
CHKB-CPT1BH3BT56 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
CHKB-CPT1BH3BT56 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AL365440.1-201ENST00000436135 2167 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU6-799P-201ENST00000363567 107 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 RN7SKP162-201ENST00000363605 345 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 GSTA8P-201ENST00000404253 637 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 COX6CP17-201ENST00000421389 185 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC073310.1-201ENST00000423226 1033 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AP002371.1-201ENST00000463604 433 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC103975.1-201ENST00000482506 483 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 RN7SL691P-201ENST00000494487 301 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 SETP14-201ENST00000497538 873 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms