Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC090337.1-201ENST00000579651 2074 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 MT-TP-201ENST00000387461 68 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 HLFP1-201ENST00000402375 499 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 RN7SKP285-201ENST00000410137 318 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 MTND4LP14-201ENST00000429447 288 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC005019.1-201ENST00000436455 431 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 SNORA71B-202ENST00000439232 272 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 BUD31P2-201ENST00000449374 300 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 RPL23AP14-201ENST00000468281 468 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 MTND6P6-201ENST00000478031 263 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC108157.1-201ENST00000510511 539 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC016550.3-201ENST00000515706 767 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 SUMO2P20-201ENST00000520803 283 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 OR7E13P-201ENST00000526052 910 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 MIR4425-201ENST00000580572 84 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC242628.1-201ENST00000606810 391 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 CR589904.2-201ENST00000612533 440 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL442067.2-201ENST00000614033 363 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC025016.1-201ENST00000616746 682 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP006248.3-201ENST00000623580 594 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 RPL23AP61-201ENST00000623642 466 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC090229.1-201ENST00000590983 1609 ntBASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TMX2-CTNND1H3BSU7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 SNORD9-201ENST00000362566 104 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 SNORD51.1-201ENST00000365405 77 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 SNORD65-201ENST00000391079 73 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 Z86062.1-201ENST00000406773 777 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 RNF19BPX-201ENST00000426224 625 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL606490.7-201ENST00000433136 191 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 CASP3P1-201ENST00000446037 609 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 CALM1P2-201ENST00000452941 448 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 RBMY2UP-201ENST00000453474 324 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC007967.1-201ENST00000455422 1159 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC037198.2-201ENST00000478845 733 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 RPS3AP50-201ENST00000487064 803 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 ARL2BPP6-201ENST00000512757 439 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 SETP12-201ENST00000514068 805 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 RNA5SP309-201ENST00000516670 106 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 RNU6-467P-201ENST00000517027 110 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC008489.1-201ENST00000524271 483 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP000889.1-201ENST00000530968 660 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC011602.1-201ENST00000546484 331 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 MIR4716-201ENST00000579628 84 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 BMS1P7-201ENST00000602440 1052 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 C2orf27A-204ENST00000623058 969 ntBASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
TMX2-CTNND1H3BSU7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 CEP170P1-201ENST00000502249 4587 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC009313.2-201ENST00000417893 1941 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms