Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL132657.2-201ENST00000564417 358 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 MTND6P33-201ENST00000571794 183 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC008088.1-201ENST00000580993 280 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AL583856.2-201ENST00000606298 543 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC010857.1-201ENST00000606398 594 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 ZYXP1-201ENST00000617638 118 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AP002782.1-201ENST00000623107 614 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC079416.3-201ENST00000624479 549 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC010608.2-201ENST00000624830 470 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 CR392039.4-201ENST00000624968 501 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC068724.3-201ENST00000625906 87 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 Z82217.1-201ENST00000625157 8149 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 RNA5SP52-201ENST00000362448 134 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 RNA5SP130-201ENST00000364431 114 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 RN7SKP227-201ENST00000364445 330 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 RNU11-4P-201ENST00000391149 133 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 RNA5SP39-201ENST00000411245 120 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AL450992.3-201ENST00000413192 568 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 OR4K6P-201ENST00000416478 897 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 Z75741.2-201ENST00000417272 1167 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 OR4C10P-201ENST00000434991 931 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 RPL23AP89-201ENST00000439324 255 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC002542.1-201ENST00000440683 193 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 RPL21P133-201ENST00000443666 476 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 PTENP1-201ENST00000447117 1215 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 NPM1P13-201ENST00000452663 865 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AL122001.1-201ENST00000457027 370 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 RN7SL604P-201ENST00000492589 296 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC124293.1-201ENST00000530034 493 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC063950.1-201ENST00000552036 308 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 VN1R74P-201ENST00000613259 503 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC068831.8-201ENST00000620171 435 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC067852.7-201ENST00000623270 535 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC116667.1-201ENST00000604855 2072 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC138393.1-206ENST00000540997 1886 ntBASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX9Q9Y5X1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC006042.3-201ENST00000454684 1469 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC092162.3-201ENST00000624511 1624 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 OR11H4-201ENST00000315409 1082 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 RHOT1P2-201ENST00000366423 333 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 RNU1-13P-201ENST00000384499 162 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 RNU6-575P-201ENST00000411326 105 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AL008987.1-201ENST00000415528 237 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 MTND5P25-201ENST00000430499 799 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 MTND2P22-201ENST00000444325 1033 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AL451050.1-201ENST00000450126 415 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 DNAJC19P8-201ENST00000452887 259 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms