Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC073136.2-201ENST00000417282 849 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 SEPT2P1-201ENST00000419651 180 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 RPL7AP25-201ENST00000423357 805 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PKP3Q9Y446 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC118469.1-201ENST00000442943 488 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 MTND2P19-201ENST00000449129 1012 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 DDX39BP2-208ENST00000453923 258 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 NDUFA12P1-201ENST00000455914 406 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 MTND2P28-201ENST00000457540 1044 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 RPL31P3-201ENST00000458430 332 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC092754.2-201ENST00000463506 460 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 RN7SL41P-201ENST00000476144 297 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 NCOR1P1-202ENST00000486162 291 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 RPL7P38-201ENST00000488396 739 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC104685.1-201ENST00000502445 371 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 HMGB3P13-201ENST00000511263 607 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 CDH12P4-201ENST00000517835 295 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 CDH12P3-201ENST00000517935 295 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 CDH12P1-201ENST00000518435 295 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC090515.3-201ENST00000560431 315 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AL512347.1-201ENST00000566420 503 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC074051.3-201ENST00000570238 358 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 NBR2-204ENST00000587322 63 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC091946.2-201ENST00000606105 291 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AL008729.2-201ENST00000606393 473 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC090948.2-201ENST00000607363 564 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AP002360.3-201ENST00000607673 710 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC020634.1-201ENST00000608701 549 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 AC019193.2-201ENST00000610012 634 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 AL390862.1-201ENST00000635467 1469 ntBASIC4.47□□□□□ -1.69
PKP3Q9Y446 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.47□□□□□ -1.69
PKP3Q9Y446 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.46□□□□□ -1.69
PKP3Q9Y446 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.46□□□□□ -1.69
PKP3Q9Y446 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PKP3Q9Y446 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 MTND4P34-201ENST00000572715 1371 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PKP3Q9Y446 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 RNU1-20P-201ENST00000363314 162 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 RNA5SP151-201ENST00000365632 117 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PKP3Q9Y446 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PKP3Q9Y446 AC019155.1-201ENST00000382242 574 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 SNORD116-9-201ENST00000384000 95 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 SNORD116-3-201ENST00000384287 95 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 SNORD116-7-201ENST00000384404 95 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 RNU1-44P-201ENST00000384453 163 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 SNORD116-5-201ENST00000384462 95 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 MIR129-1-201ENST00000384972 72 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 RNA5SP332-201ENST00000391063 115 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 DSTNP4-201ENST00000399472 474 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 AL021407.1-201ENST00000404531 386 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 AL078604.1-201ENST00000404609 466 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 MIR1284-201ENST00000408337 120 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PKP3Q9Y446 AC009237.10-201ENST00000414112 510 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 AC004448.2-201ENST00000422360 586 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 B3GNT2P1-201ENST00000434960 952 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 ISCA1P2-201ENST00000438679 421 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 ELOCP8-201ENST00000439309 332 ntBASIC4.46□□□□□ -1.7
PKP3Q9Y446 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.46□□□□□ -1.7
PKP3Q9Y446 ELOCP15-201ENST00000442090 332 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms