Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC108751.5-201ENST00000492880 1336 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AP000542.2-201ENST00000623199 6179 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RPL23P2-201ENST00000320371 421 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 U3.2-201ENST00000362981 210 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RNU5D-1-201ENST00000363299 116 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 U8.4-201ENST00000363626 134 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RNA5SP88-201ENST00000365560 109 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 Y_RNA.535-201ENST00000384612 99 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 SNORA40.3-201ENST00000390964 122 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RNU6-1009P-201ENST00000390996 107 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RNU6-780P-201ENST00000391030 104 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AP000580.1-201ENST00000404439 358 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RNU6-77P-201ENST00000410554 91 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 OFD1P18Y-201ENST00000420889 959 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC093698.1-201ENST00000423843 571 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 FABP7P1-201ENST00000424004 391 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC007742.1-201ENST00000425789 329 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC005033.1-201ENST00000428904 813 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 ELOCP26-201ENST00000436067 329 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 MTND5P14-201ENST00000441481 1267 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 PSPHP1-201ENST00000450062 261 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AL389915.2-201ENST00000454576 441 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 SNORD42A-201ENST00000459584 64 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RN7SL443P-201ENST00000464331 290 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RN7SL329P-201ENST00000467740 299 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AP000797.1-201ENST00000478870 387 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RPL7P6-201ENST00000480903 738 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 PTGES3P3-201ENST00000511479 482 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 MTCO1P35-201ENST00000515270 228 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 IGJP1-201ENST00000522682 475 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC137768.1-201ENST00000549998 553 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 BPTFP1-201ENST00000579209 492 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 VN1R79P-201ENST00000593540 513 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AL354760.1-201ENST00000608357 643 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC083843.3-201ENST00000623679 2186 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC120349.2-201ENST00000625002 298 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC006026.1-201ENST00000444025 1803 ntBASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.76□□□□□ -1.65
PACSIN3Q9UKS6 AC131971.1-201ENST00000332881 1482 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 AL034370.1-201ENST00000397254 1590 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 HMGB1P5-201ENST00000255320 642 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 RNU5F-6P-201ENST00000362979 116 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 RNU6-433P-201ENST00000363216 104 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 RNU6-1090P-201ENST00000364065 94 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 RNU1-43P-201ENST00000365052 165 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 RNU6-452P-201ENST00000384406 107 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 Y_RNA.509-201ENST00000384506 99 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 SNORA70.10-201ENST00000384515 134 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 MIR765-201ENST00000390226 114 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 AL645927.1-201ENST00000396783 406 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 AP000357.1-201ENST00000409926 1165 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 AC068533.2-201ENST00000411872 306 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 AC092745.2-202ENST00000411880 369 ntBASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.75□□□□□ -1.65
PACSIN3Q9UKS6 CEACAMP7-201ENST00000444105 496 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms