Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC104306.1-201ENST00000449702 371 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AL161747.1-201ENST00000480068 358 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RN7SL558P-201ENST00000497468 299 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC004069.2-201ENST00000505438 1114 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC010285.3-201ENST00000511668 676 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 OR7H2P-201ENST00000513483 306 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 HMGB1P23-201ENST00000518743 568 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AL049839.1-201ENST00000556151 657 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC012435.1-202ENST00000568772 240 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC022884.3-201ENST00000579571 248 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 BNIP3P22-201ENST00000593399 556 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC128687.1-201ENST00000605304 619 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC087752.4-201ENST00000605911 462 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC092354.1-201ENST00000606057 376 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC087241.4-201ENST00000612441 480 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 MIR7844-201ENST00000616161 122 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AL022401.1-201ENST00000619498 108 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 RNF6P1-201ENST00000444889 1784 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 DBF4P1-201ENST00000412976 1892 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 Y_RNA.18-201ENST00000362461 102 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 PIGPP2-201ENST00000411569 458 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 CEACAMP8-201ENST00000413902 580 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 UBE2V1P10-201ENST00000414685 269 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 ELOCP17-201ENST00000414751 326 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 RPL23AP39-201ENST00000415533 405 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 RPL36AP10-201ENST00000421785 322 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC104333.2-201ENST00000422630 192 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC009965.2-201ENST00000425328 970 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 RPL31P54-201ENST00000429803 370 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 RPS24P8-201ENST00000431490 402 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 PPIAP17-201ENST00000438507 471 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 UBE2V1P5-201ENST00000440070 405 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC116337.2-201ENST00000477662 156 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 ENPP7P9-201ENST00000514456 627 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AP001880.2-201ENST00000538233 448 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 RN7SL802P-201ENST00000577858 299 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 MIR4716-201ENST00000579628 84 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 MIR4270-201ENST00000581799 70 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 NTAN1P1-201ENST00000603150 646 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AL031775.1-201ENST00000607014 887 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC055764.2-201ENST00000610089 670 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC005332.10-201ENST00000612725 619 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC018926.3-201ENST00000618841 406 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC134882.1-201ENST00000603738 1676 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
DKK3Q9UBP4 SALL4P2-201ENST00000423288 2910 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 ZFRP1-201ENST00000457579 2970 ntBASIC4.86□□□□□ -1.63
DKK3Q9UBP4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
DKK3Q9UBP4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
DKK3Q9UBP4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
DKK3Q9UBP4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.85□□□□□ -1.63
DKK3Q9UBP4 MAPK10-320ENST00000641462 6696 ntBASIC4.85□□□□□ -1.63
DKK3Q9UBP4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
DKK3Q9UBP4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
DKK3Q9UBP4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
DKK3Q9UBP4 AL121657.1-201ENST00000327215 531 ntBASIC4.85□□□□□ -1.63
DKK3Q9UBP4 RNU5D-1-201ENST00000363299 116 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms