Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 RNU4-1-201ENST00000363925 141 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 RNU6-853P-201ENST00000364306 107 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 RNA5SP132-201ENST00000364725 118 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 Y_RNA.422-201ENST00000384054 114 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 RNU6-738P-201ENST00000384531 106 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 MIR649-201ENST00000384843 97 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 RNU11-201ENST00000387069 134 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 EIF5P1-201ENST00000400019 1231 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 OR4K12P-201ENST00000406538 961 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 RNU2-50P-201ENST00000410494 143 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 AL807761.1-201ENST00000417622 171 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC009965.2-201ENST00000425328 970 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 SRIP2-201ENST00000428470 166 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC079781.2-201ENST00000446424 169 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 RPS3AP50-201ENST00000487064 803 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC006504.6-201ENST00000590142 199 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC010525.2-201ENST00000590920 195 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AL360012.1-201ENST00000602813 131 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 Z98200.1-201ENST00000607298 470 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC109309.2-201ENST00000612597 332 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC093838.1-201ENST00000613014 469 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC022106.2-201ENST00000620114 757 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC000095.2-202ENST00000637415 154 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 MTND5P42-201ENST00000637720 498 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC092125.1-201ENST00000562568 1995 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AL592429.1-201ENST00000403909 1473 ntBASIC6.14□□□□□ -1.43
CNTN3Q9P232 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 AC114546.3-201ENST00000623582 1734 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC009229.4-201ENST00000623854 1947 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNTN3Q9P232 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CNTN3Q9P232 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNTN3Q9P232 RN7SKP124-201ENST00000364730 341 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 RNU1-74P-201ENST00000384108 171 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 ARF4P3-201ENST00000397387 509 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AL136116.1-201ENST00000403591 381 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 RN7SKP279-201ENST00000411383 298 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 RPS7P15-201ENST00000415804 584 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AL450023.1-201ENST00000450868 751 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 RNU7-63P-201ENST00000459054 62 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC018638.3-201ENST00000461273 132 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 RPL7AP10-201ENST00000481016 791 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC108693.1-201ENST00000496068 432 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 RN7SKP116-201ENST00000516902 319 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC022616.3-201ENST00000523940 148 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 LSM6P2-201ENST00000552208 177 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC020661.2-201ENST00000560114 134 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms