Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC004943.3-201ENST00000624116 600 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AC091948.2-201ENST00000636510 279 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AL732372.2-225ENST00000642124 456 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC006504.1-201ENST00000562493 3666 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 RNU6-283P-201ENST00000364788 107 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AMD1P2-201ENST00000412936 992 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC004987.3-201ENST00000413879 771 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC023128.2-201ENST00000420880 1223 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC073310.1-201ENST00000423226 1033 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 ETF1P3-201ENST00000430422 1160 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 RPL37P1-201ENST00000432310 284 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AL500527.1-201ENST00000448532 255 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 SNORD108-201ENST00000459332 71 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC008494.2-201ENST00000514544 370 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 MIR2114-201ENST00000516645 80 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 SERPINE4P-201ENST00000554978 281 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AL121576.1-201ENST00000556055 276 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC015911.5-201ENST00000587076 451 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC039056.2-201ENST00000622261 511 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AL732618.1-201ENST00000623251 301 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 OR6C71P-202ENST00000641886 1107 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 AC011978.2-201ENST00000569835 2054 ntBASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCSER1Q9C0I3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 ASNSP1-204ENST00000641977 1664 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 RNA5SP42-201ENST00000364278 115 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 U8.11-201ENST00000384699 133 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 U8.12-201ENST00000384701 133 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 MIR554-201ENST00000384874 96 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 DNAJC19P6-201ENST00000401853 280 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 RNU6ATAC-201ENST00000408749 126 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 SNORA57.3-201ENST00000411095 141 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 HMGB3P31-201ENST00000413333 595 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 NUP35P2-201ENST00000416748 943 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC245054.1-201ENST00000420944 258 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 SDCBPP2-201ENST00000424643 885 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 MORF4L1P7-201ENST00000426038 703 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AL445584.1-201ENST00000431451 330 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 U8.18-201ENST00000459285 133 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC108729.2-201ENST00000476543 840 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC090071.1-201ENST00000507713 644 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC008565.1-201ENST00000509046 885 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 RN7SKP234-201ENST00000517173 224 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC023161.2-201ENST00000551218 780 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 TRAV15-201ENST00000556680 249 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC112230.1-201ENST00000604342 547 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AL049634.3-201ENST00000604968 457 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 RNA5SP108-201ENST00000605921 117 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms