Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 Y_RNA.292-201ENST00000364904 97 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 SNORD78.2-201ENST00000391076 69 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AL079342.1-201ENST00000401460 267 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 STSP1-201ENST00000412493 1151 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 BMS1P22-201ENST00000414726 313 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC063979.1-201ENST00000415539 377 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AL391219.1-201ENST00000422570 483 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 BX323845.3-201ENST00000428215 527 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 SNX18P14-201ENST00000429308 574 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 GAPDHP48-201ENST00000436626 961 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RPE-210ENST00000438204 796 ntTSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RPL7L1P1-201ENST00000448259 785 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AL034399.1-201ENST00000451535 380 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 DBIL5P-202ENST00000453414 250 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SL395P-201ENST00000462960 291 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC109454.1-201ENST00000471205 498 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC068522.1-201ENST00000482895 345 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RPS4XP23-201ENST00000487801 237 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RPS27AP13-201ENST00000498403 237 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC114300.1-201ENST00000502347 280 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 MRPS33P2-201ENST00000507850 322 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RPS23-208ENST00000512493 443 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 SNORA31.3-201ENST00000516029 96 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 snoU109.6-201ENST00000516831 118 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 TBCA-209ENST00000522370 435 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 CASP1P1-201ENST00000526345 212 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC007458.1-201ENST00000542812 373 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC144548.1-201ENST00000549577 324 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SL155P-201ENST00000581538 263 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AP000787.2-201ENST00000604432 568 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 CYCSP1-201ENST00000604815 315 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC123912.5-201ENST00000605470 343 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC097381.3-201ENST00000608962 462 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC009318.2-201ENST00000610917 651 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC104465.1-201ENST00000611365 139 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 ELMO2P1-202ENST00000614283 794 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AL590240.4-201ENST00000616908 390 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 PABPC1P8-201ENST00000452851 2086 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 MSL3P1-202ENST00000440028 1468 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AL590065.1-201ENST00000603371 4774 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AC078880.4-201ENST00000617627 1749 ntBASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-1Q9BYR8 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms