Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 DGKI-213ENST00000614521 2799 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 SALL2-201ENST00000450879 3178 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC005332.9-201ENST00000620266 2921 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 EXOC7P1-201ENST00000509881 2059 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 MBP-206ENST00000397863 4800 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-986P-201ENST00000363133 102 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA71E-201ENST00000365032 132 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-1280P-201ENST00000365211 107 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 CRP-204ENST00000368112 787 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 ST3GAL3-217ENST00000372369 1038 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-975P-201ENST00000384296 105 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.510-201ENST00000384511 114 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA1.3-201ENST00000384676 136 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR503-201ENST00000385270 71 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORD77.2-201ENST00000391045 68 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA48.5-201ENST00000391143 135 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR942-201ENST00000401111 86 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AL031003.1-201ENST00000404229 172 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AL590617.1-201ENST00000405630 748 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AP000567.1-201ENST00000406413 156 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.606-201ENST00000410579 103 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SKP53-201ENST00000411337 315 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 Z97987.1-202ENST00000411708 391 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORD56-201ENST00000413522 71 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF70P1-201ENST00000417480 624 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 MED15P4-201ENST00000417579 393 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC104794.1-201ENST00000425235 312 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RPSAP8-201ENST00000429844 889 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 CHCHD4P2-201ENST00000431135 420 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RPL18AP7-201ENST00000435924 524 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC244098.1-201ENST00000436499 275 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RPS12P2-201ENST00000439728 269 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC246785.1-201ENST00000440916 264 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC073046.1-201ENST00000441217 390 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AL365356.2-201ENST00000441526 196 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 TRAF3IP2-AS1-205ENST00000442928 548 ntTSL 4 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 IFNWP5-201ENST00000445100 588 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC013480.1-201ENST00000451514 346 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 COTL1P2-201ENST00000455360 352 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC005165.2-201ENST00000466070 380 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC087501.2-201ENST00000466869 581 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SL51P-201ENST00000468230 285 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC106820.1-201ENST00000468708 420 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 TRBV8-2-201ENST00000475637 270 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC016968.1-201ENST00000479610 697 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC048341.1-201ENST00000480482 403 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC078814.1-201ENST00000484568 645 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SL236P-201ENST00000484759 284 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 HNRNPA1P20-201ENST00000484852 955 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AC009153.1-201ENST00000485799 496 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 AL139099.1-201ENST00000497398 403 ntBASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RPL23AP63-201ENST00000498752 471 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms