Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNU6-549P-201ENST00000384433 107 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AL590290.1-201ENST00000405336 380 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 RPL31P52-201ENST00000407532 367 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 SNORA57.3-201ENST00000411095 141 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC114814.2-201ENST00000419195 485 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 RPS12P23-201ENST00000419579 400 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AL732292.1-201ENST00000426692 226 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 ACTR3P2-201ENST00000439585 1257 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC068135.1-201ENST00000446164 246 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 snoU13.1-201ENST00000459157 104 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 RPL23AP62-201ENST00000463396 453 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 RPL23AP12-201ENST00000467573 473 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 RPS4XP14-201ENST00000493072 781 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC104108.1-201ENST00000509930 412 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC119751.1-201ENST00000513357 765 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 OR8I1P-201ENST00000529291 931 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC006116.5-201ENST00000591936 559 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC055764.2-201ENST00000610089 670 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AL049539.1-201ENST00000611964 459 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 OR6C71P-202ENST00000641886 1107 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 NSRP1P1-201ENST00000444067 1693 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 MFSD8-216ENST00000641147 4009 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC006504.1-201ENST00000562493 3666 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 RNA5SP447-201ENST00000363749 119 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 ANAPC10P1-201ENST00000395991 556 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AL603865.2-201ENST00000401679 213 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AIMP1P1-201ENST00000418670 937 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 EXOSC3P1-201ENST00000448649 500 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AL162151.2-201ENST00000448875 158 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 RPL9P32-201ENST00000464118 620 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC020898.1-201ENST00000474167 787 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC117394.1-201ENST00000477323 567 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC084198.1-201ENST00000477747 402 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC008565.1-201ENST00000509046 885 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 HPRT1P1-201ENST00000509498 657 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 TXNP6-201ENST00000510190 310 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 SNORA19.3-201ENST00000516165 130 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC104417.1-201ENST00000523974 751 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC006518.2-201ENST00000542513 940 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC087897.1-201ENST00000550134 156 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 MIR4715-201ENST00000584117 79 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AL137849.1-201ENST00000604767 169 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC010680.4-201ENST00000605334 543 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC018816.2-201ENST00000621460 353 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC104985.3-201ENST00000623479 597 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC008993.2-201ENST00000631744 806 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AL021368.2-201ENST00000606125 5352 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 MTCO1P6-201ENST00000481192 1384 ntBASIC3.76□□□□□ -1.81
CCDC28BQ9BUN5 AC138393.1-206ENST00000540997 1886 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms