Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 UBE2D3P1-201ENST00000436669 444 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 RN7SL93P-201ENST00000463035 293 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 CENPBD1P1-201ENST00000464061 469 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 IGKV2-36-201ENST00000519999 223 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AP003122.3-201ENST00000526316 255 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 Y_RNA.355-201ENST00000365462 98 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 ARL5AP4-201ENST00000430731 512 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AL590103.1-201ENST00000434488 307 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AC008565.1-201ENST00000509046 885 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 EIF1P6-201ENST00000600054 334 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AC016727.1-205ENST00000605437 569 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 uc_338.25-201ENST00000613756 156 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AP006437.1-201ENST00000641440 3685 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AL031595.2-201ENST00000624215 19071 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 USP12PY-201ENST00000427677 1064 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 RNA5SP24-201ENST00000516478 95 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 AC018555.1-201ENST00000567548 1980 ntBASIC2.61□□□□□ -1.99
CSMD1Q96PZ7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 RNA5SP99-201ENST00000364020 114 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 SNORA71.1-201ENST00000364523 117 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 RN7SKP56-201ENST00000410513 331 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 SEPT7P6-201ENST00000469999 1143 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 NPM1P29-201ENST00000483112 803 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AC018797.3-201ENST00000513388 1241 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AL049874.4-201ENST00000557593 255 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 MTND5P24-201ENST00000438892 1767 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AL139415.2-201ENST00000431968 163 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AC027176.1-201ENST00000560204 514 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 BTF3L4P4-201ENST00000506381 449 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 OR5AP1P-201ENST00000529730 940 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 AL354950.1-201ENST00000614150 568 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD1Q96PZ7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 MIR448-201ENST00000362131 111 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 SNORA3.2-201ENST00000408221 125 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 VTA1P1-201ENST00000414044 866 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 RPL9P32-201ENST00000464118 620 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 AC055855.1-201ENST00000489563 579 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 CYP2C60P-201ENST00000566088 139 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 AC010680.4-201ENST00000605334 543 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 AC015813.4-201ENST00000610469 179 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 OR2X1P-201ENST00000421144 687 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms