Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AC053481.1-201ENST00000467217 306 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC037198.2-201ENST00000478845 733 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC026979.1-201ENST00000492525 396 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AL024509.2-201ENST00000493462 493 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC147055.4-201ENST00000504399 745 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 RNU6-416P-201ENST00000516265 103 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 HIGD1AP10-201ENST00000527837 282 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 MIR548Y-201ENST00000582739 110 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AL356274.1-201ENST00000617064 410 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 AC073968.1-201ENST00000618594 637 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 MAPK10-286ENST00000641208 8747 ntBASIC5.06□□□□□ -1.6
PGBD1Q96JS3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PGBD1Q96JS3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 RNU6-1339P-201ENST00000363574 91 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 Y_RNA.408-201ENST00000383987 102 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC097374.1-203ENST00000400783 485 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC073335.1-201ENST00000427776 363 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 RPS3AP54-201ENST00000435535 734 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC009263.1-201ENST00000441193 1239 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 PHBP16-201ENST00000446318 950 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 TPMTP4-201ENST00000450749 678 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 SETP11-201ENST00000473027 690 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC002456.2-201ENST00000509356 380 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC079395.1-201ENST00000510981 262 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 HNRNPKP5-201ENST00000515300 253 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC022447.1-201ENST00000515358 464 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 ROCK1P1-201ENST00000573767 549 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 ZNF415P1-201ENST00000582279 1166 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 MIR3611-201ENST00000584484 83 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AL137072.1-201ENST00000603444 466 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC103881.1-201ENST00000603476 538 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC090525.3-201ENST00000605601 189 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC092354.2-201ENST00000607786 514 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC008443.7-201ENST00000622195 246 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC005539.1-201ENST00000443768 1479 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 AC100871.1-201ENST00000507871 1456 ntBASIC5.05□□□□□ -1.6
PGBD1Q96JS3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PGBD1Q96JS3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 RNU6-931P-201ENST00000363850 107 ntBASIC5.04□□□□□ -1.6
PGBD1Q96JS3 RNU6-1320P-201ENST00000390838 107 ntBASIC5.04□□□□□ -1.6
PGBD1Q96JS3 RNU6-1269P-201ENST00000391139 107 ntBASIC5.04□□□□□ -1.6
PGBD1Q96JS3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.04□□□□□ -1.6
PGBD1Q96JS3 RNU6-77P-201ENST00000410554 91 ntBASIC5.04□□□□□ -1.6
PGBD1Q96JS3 MIR1911-201ENST00000410783 80 ntBASIC5.04□□□□□ -1.6
PGBD1Q96JS3 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.04□□□□□ -1.6
PGBD1Q96JS3 RPL7P44-201ENST00000424827 742 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms