Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
TRIM41Q8WV44 AP002907.1-201ENST00000606361 1430 ntBASIC9.65□□□□□ -0.87
TRIM41Q8WV44 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TRIM41Q8WV44 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TRIM41Q8WV44 AC073365.1-203ENST00000641055 1992 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 SNORA62.2-201ENST00000364672 152 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 RNA5SP505-201ENST00000364748 108 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 RNA5SP30-201ENST00000365552 115 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 SNORA22B-201ENST00000383876 138 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 RNU6-505P-201ENST00000384427 107 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 RPS20P2-201ENST00000402520 389 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 RNU6-1148P-201ENST00000410992 104 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 OARD1-211ENST00000480585 829 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 DUTP1-201ENST00000493631 470 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 GAPDHP56-201ENST00000506031 988 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 MIR4284-201ENST00000578924 81 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 AC087588.2-201ENST00000617667 426 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 MTND4LP32-201ENST00000636111 270 ntBASIC9.64□□□□□ -0.87
TRIM41Q8WV44 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM41Q8WV44 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 MIR134-201ENST00000385258 73 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 RNU6-1106P-201ENST00000390845 107 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 CISD1P1-201ENST00000393907 327 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 RNU2-9P-201ENST00000410194 145 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 CYCSP10-201ENST00000417973 294 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC113412.1-201ENST00000425840 504 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AL035404.1-201ENST00000497982 568 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 CCDC34P1-201ENST00000507441 517 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 PCBP2P3-201ENST00000509726 843 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC105417.1-201ENST00000514691 285 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 RNU6-559P-201ENST00000516151 98 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC004817.2-201ENST00000561794 651 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC090312.2-201ENST00000582687 378 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AP001330.4-201ENST00000604350 154 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 CTHRC1P1-201ENST00000605383 469 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AL080274.1-201ENST00000605565 220 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AL161616.1-201ENST00000611867 286 ntBASIC9.63□□□□□ -0.87
TRIM41Q8WV44 TEX41-254ENST00000626394 423 ntTSL 5 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC9.63□□□□□ -0.87
TRIM41Q8WV44 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 AC046144.1-201ENST00000478559 1853 ntBASIC9.62□□□□□ -0.87
TRIM41Q8WV44 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 SNRPEP3-201ENST00000338402 276 ntBASIC9.62□□□□□ -0.87
TRIM41Q8WV44 Y_RNA.231-201ENST00000364358 102 ntBASIC9.62□□□□□ -0.87
TRIM41Q8WV44 RNU6-1158P-201ENST00000391167 107 ntBASIC9.62□□□□□ -0.87
TRIM41Q8WV44 TEX41-205ENST00000431734 529 ntTSL 4 BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 MEPE-206ENST00000511670 550 ntTSL 4 BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 SNORD60.2-201ENST00000516883 86 ntBASIC9.62□□□□□ -0.87
TRIM41Q8WV44 AC099489.2-201ENST00000574976 260 ntBASIC9.62□□□□□ -0.87
TRIM41Q8WV44 AC023509.5-201ENST00000617434 807 ntBASIC9.62□□□□□ -0.87
TRIM41Q8WV44 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 NAMPTP1-201ENST00000440465 2514 ntBASIC9.62□□□□□ -0.87
TRIM41Q8WV44 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC9.62□□□□□ -0.87
TRIM41Q8WV44 LINC00561-201ENST00000565815 2738 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms