Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 UBE2D3P3-201ENST00000426992 425 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC236972.1-201ENST00000433225 199 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 CCRL1P1-201ENST00000449542 1053 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 RPL31P20-201ENST00000449593 360 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC078857.1-201ENST00000469870 667 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 METTL15P1-201ENST00000481421 1045 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 MTCO3P28-201ENST00000513351 515 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 EEF1A1P37-201ENST00000522748 715 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC022146.1-201ENST00000595307 847 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 NIFKP6-201ENST00000598115 845 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC013444.2-201ENST00000603317 787 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 DUXAP3-201ENST00000603616 594 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC135178.6-201ENST00000605314 398 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AL356274.1-201ENST00000617064 410 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC069209.1-201ENST00000619282 651 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 AP000676.4-201ENST00000624659 623 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 AP003399.1-201ENST00000637534 361 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNED1Q8TER0 BDP1P-201ENST00000582658 1990 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNED1Q8TER0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNED1Q8TER0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.4□□□□□ -1.71
SNED1Q8TER0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNED1Q8TER0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNED1Q8TER0 AC010329.2-201ENST00000595195 2737 ntBASIC4.4□□□□□ -1.71
SNED1Q8TER0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 RNU6-1251P-201ENST00000364502 107 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 Y_RNA.510-201ENST00000384511 114 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 AL034403.1-201ENST00000399414 885 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 RN7SKP111-201ENST00000410349 271 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AC096638.2-201ENST00000434965 711 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AC127537.2-201ENST00000439258 465 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AL445669.2-201ENST00000454425 421 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 U3.44-201ENST00000458938 192 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 snoU109.3-201ENST00000459477 145 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 MTCO2P9-201ENST00000503214 694 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 RPL23AP94-201ENST00000512518 302 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 IGHV3-63-201ENST00000518422 341 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 VTA1P2-201ENST00000520205 911 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 MIR5004-201ENST00000579078 107 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 RMST_5.1-201ENST00000618704 126 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 AP003476.1-201ENST00000623984 516 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.39□□□□□ -1.71
SNED1Q8TER0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNED1Q8TER0 LINC01109-201ENST00000603837 3081 ntBASIC4.39□□□□□ -1.71
SNED1Q8TER0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 TAS2R15P-201ENST00000390674 928 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 LUZP4P1-201ENST00000415420 344 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 MTND5P25-201ENST00000430499 799 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 ELOCP11-201ENST00000436690 332 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 MTCYBP31-201ENST00000438855 1122 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 ELOCP16-201ENST00000444494 332 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 RPL21P10-201ENST00000463521 490 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms