Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 RNU2-71P-201ENST00000411395 189 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC074367.1-201ENST00000438685 1125 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC022034.3-201ENST00000471393 478 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AL139099.1-201ENST00000497398 403 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC111193.1-201ENST00000504097 155 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 MTCYBP41-201ENST00000528913 1123 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AP003717.3-201ENST00000544832 1180 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AL163153.1-201ENST00000554223 283 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC053481.4-201ENST00000583164 216 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC107905.1-201ENST00000616204 426 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AC016717.3-201ENST00000624730 554 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 CDRT1-208ENST00000630868 794 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLHC1Q8NHS4 AP004289.2-201ENST00000444413 1457 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC118273.1-201ENST00000525324 3006 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 GTF2H2B-203ENST00000508065 1432 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 RNU6-335P-201ENST00000364563 113 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 RNA5SP235-201ENST00000365411 114 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 HMGN2P20-201ENST00000437531 273 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 HMGB3P8-201ENST00000449709 577 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 RPL5P24-201ENST00000463742 885 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 RN7SKP289-201ENST00000517244 295 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 CYP2C60P-201ENST00000566088 139 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC136624.4-201ENST00000573044 370 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AL732372.2-225ENST00000642124 456 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 AC116096.1-201ENST00000566804 2314 ntBASIC3.47□□□□□ -1.85
CLHC1Q8NHS4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CLHC1Q8NHS4 ZNF542P-204ENST00000482727 1305 ntBASIC3.46□□□□□ -1.85
CLHC1Q8NHS4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AL136164.4-201ENST00000625013 2135 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 RNA5SP42-201ENST00000364278 115 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 SNORA48.8-201ENST00000391324 134 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AL136116.1-201ENST00000403591 381 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AL138880.1-201ENST00000405824 642 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 RNU2-65P-201ENST00000410162 185 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 SNORA57.3-201ENST00000411095 141 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AC023128.2-201ENST00000420880 1223 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms