Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE4Q8N205 WISP1-OT1-201ENST00000602893 642 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 AP003973.1-201ENST00000604639 691 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC010201.1-201ENST00000605051 540 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE4Q8N205 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE4Q8N205 VN1R74P-201ENST00000613259 503 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC091905.2-201ENST00000623143 306 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC119674.1-212ENST00000641155 993 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC107068.1-201ENST00000563286 4218 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC104260.2-201ENST00000623551 3497 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE4Q8N205 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE4Q8N205 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE4Q8N205 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE4Q8N205 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE4Q8N205 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE4Q8N205 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE4Q8N205 Y_RNA.465-201ENST00000384293 102 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 RNY3P14-201ENST00000384309 102 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 AL031577.2-201ENST00000404133 280 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 FCF1P9-201ENST00000412546 282 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC234781.4-201ENST00000419384 244 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 DPY19L1P2-201ENST00000426647 915 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 VTI1BP4-201ENST00000427516 527 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 MRPS10P2-201ENST00000431226 381 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 GOT2P5-201ENST00000433995 546 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC007327.1-201ENST00000447461 264 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 RPL30P6-201ENST00000475925 342 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC104685.1-201ENST00000502445 371 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC113430.1-201ENST00000506872 718 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE4Q8N205 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC053481.4-201ENST00000583164 216 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 MIR4999-201ENST00000585029 91 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC125494.3-201ENST00000602759 455 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 AP000403.1-201ENST00000603349 851 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC090186.1-201ENST00000605991 572 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 AC091953.5-201ENST00000622919 233 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE4Q8N205 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SYNE4Q8N205 MTCO1P7-201ENST00000419523 1542 ntBASIC5.38□□□□□ -1.55
SYNE4Q8N205 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 RLIMP1-201ENST00000339626 1680 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 OR51H2P-202ENST00000641424 3046 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 CDC27P2-201ENST00000425026 1922 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC107021.2-201ENST00000567714 2095 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 RNU6-694P-201ENST00000364071 147 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 RNA5SP175-201ENST00000364275 119 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 snoZ40.1-201ENST00000364540 72 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 RNU5E-4P-201ENST00000364931 120 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 RNU6-1200P-201ENST00000384162 107 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 RNU4-31P-201ENST00000384211 141 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 RNU6-452P-201ENST00000384406 107 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 RNU2-16P-201ENST00000410712 136 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 VTA1P1-201ENST00000414044 866 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SYNE4Q8N205 PDSS1P1-201ENST00000422953 1114 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 DPRXP1-201ENST00000426312 460 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 GTF2IP7-202ENST00000436677 309 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 RPS29P7-201ENST00000439662 171 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AL357520.1-201ENST00000441557 453 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AL512326.1-201ENST00000443050 721 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 DDX39BP2-208ENST00000453923 258 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC011979.1-201ENST00000472300 483 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC069304.1-201ENST00000491593 704 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 RPS4XP18-201ENST00000495480 763 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms