Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC027229.1-201ENST00000583887 253 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AL354984.3-201ENST00000604803 325 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC004805.2-201ENST00000605382 482 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 uc_338.31-201ENST00000615595 186 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 uc_338.12-201ENST00000616344 181 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 MIR6721-201ENST00000617181 87 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 TCP11X1-202ENST00000622971 1372 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
LYSMD3Q7Z3D4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 SNORD116-11-201ENST00000383882 92 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 RNU6-444P-201ENST00000383988 108 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 MIR433-201ENST00000384837 93 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 MIR558-201ENST00000384920 94 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AL360182.1-201ENST00000397433 468 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 RNA5SP115-201ENST00000411160 107 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 ATG3P1-201ENST00000419507 911 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 PSMA6P3-201ENST00000428242 164 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AL645936.1-201ENST00000441979 518 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 RPL23AP15-201ENST00000450202 459 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC002553.2-201ENST00000453217 340 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 HMGN3P1-201ENST00000453847 193 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 SNRPFP3-201ENST00000457792 225 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 RNU6-488P-201ENST00000515918 99 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 HSPE1P2-201ENST00000554777 306 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 OR1E3-201ENST00000575608 948 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 MIR4703-201ENST00000577728 79 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 MIR3189-201ENST00000578735 73 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 MIR4420-201ENST00000583944 77 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 SMIM12P1-201ENST00000603004 274 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC098479.1-201ENST00000609225 154 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AL096712.1-201ENST00000614561 159 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 MIR6861-201ENST00000618657 64 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 AC008627.1-201ENST00000517511 1704 ntBASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD3Q7Z3D4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 AC245100.2-201ENST00000454544 1679 ntBASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 RNU6-450P-201ENST00000364654 107 ntBASIC6.26□□□□□ -1.41
LYSMD3Q7Z3D4 Y_RNA.288-201ENST00000364854 92 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms