Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC092648.1-201ENST00000425870 423 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 USP12PY-201ENST00000427677 1064 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 Z80107.1-201ENST00000436830 412 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 CYCSP43-201ENST00000438233 310 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 PPIAP17-201ENST00000438507 471 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 UBE2V1P3-201ENST00000439651 417 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 ZNF886P-201ENST00000450781 723 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 DHFRP3-201ENST00000455595 559 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 RPL23AP24-201ENST00000458203 385 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC134050.1-201ENST00000495088 933 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 IGLVIV-65-201ENST00000517313 360 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC008694.2-201ENST00000517591 306 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AP001207.1-201ENST00000524051 481 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 OR8G5-201ENST00000524943 1041 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC009643.1-201ENST00000532030 391 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 RPL26P30-202ENST00000602923 645 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AL355812.1-201ENST00000603215 216 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AL035411.2-201ENST00000604022 421 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC006023.2-201ENST00000609916 167 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 uc_338.13-201ENST00000618243 179 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AF001550.2-201ENST00000636643 217 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC097504.1-201ENST00000515103 2415 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 RNA5SP443-201ENST00000363083 132 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 Y_RNA.472-201ENST00000384322 102 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AL136310.1-201ENST00000404926 654 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 RPS20P14-201ENST00000412545 360 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 RAC1P3-201ENST00000416129 580 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 OR4K6P-201ENST00000416478 897 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AL807761.1-201ENST00000417622 171 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 MTCO1P3-201ENST00000429327 192 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 RPS29P17-201ENST00000430795 166 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 MTND2P5-201ENST00000432656 1006 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 H2AFZP6-201ENST00000444403 394 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 PHBP16-201ENST00000446318 950 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AL589880.1-201ENST00000448271 287 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 Z99714.1-201ENST00000450463 807 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 RN7SL98P-201ENST00000462271 300 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 RPL23AP44-201ENST00000482216 473 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC093840.1-201ENST00000511599 336 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC109471.1-201ENST00000511631 612 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 OR4A45P-201ENST00000529954 901 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AP003385.6-201ENST00000531603 374 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC092470.1-201ENST00000546187 132 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms