Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13CQ709C8 FAM133CP-201ENST00000332869 704 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 RPL23AP23-201ENST00000452590 471 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC005229.2-201ENST00000456995 399 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC010469.1-201ENST00000463864 576 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 DMD-205ENST00000359836 7339 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13CQ709C8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13CQ709C8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13CQ709C8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13CQ709C8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 OR51A3P-201ENST00000413596 924 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 USP12PY-201ENST00000427677 1064 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 RN7SL93P-201ENST00000463035 293 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13CQ709C8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 AL356274.1-201ENST00000617064 410 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13CQ709C8 MIR1287-201ENST00000408492 90 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC083906.5-201ENST00000503722 328 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 RNA5SP445-201ENST00000515889 115 ntBASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13CQ709C8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC2.46□□□□□ -2.01
VPS13CQ709C8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
VPS13CQ709C8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13CQ709C8 RNA5SP154-201ENST00000516193 111 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 SNORA70.19-201ENST00000516717 90 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 DPRXP4-201ENST00000578053 568 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 BNIP3P38-201ENST00000601117 544 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 AC233309.1-201ENST00000619522 751 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13CQ709C8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13CQ709C8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13CQ709C8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13CQ709C8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 AC008264.1-201ENST00000447612 367 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 AL162389.1-201ENST00000449233 177 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 IGKV2-36-201ENST00000519999 223 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13CQ709C8 AC233702.9-201ENST00000581528 203 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 AL034351.1-201ENST00000605288 668 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13CQ709C8 MIR1289-2-201ENST00000408360 111 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 RANP4-201ENST00000413361 655 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 AL031736.2-201ENST00000426573 787 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 AC112492.1-201ENST00000449607 712 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 COX6CP8-201ENST00000522620 226 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS13CQ709C8 AL049874.4-201ENST00000557593 255 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 SNORD53-201ENST00000579969 78 ntBASIC2.46□□□□□ -2.02
VPS13CQ709C8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 AL049780.3-201ENST00000624612 1583 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 U3.23-201ENST00000391132 200 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 RNA5SP104-201ENST00000410989 118 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 NANOGP6-201ENST00000429190 847 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 AC104687.1-201ENST00000485829 412 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 BTF3L4P4-201ENST00000506381 449 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 OR5AP1P-201ENST00000529730 940 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 HSPA8P1-201ENST00000425843 1833 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms