Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL390237.1-201ENST00000404226 1415 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 PABPC1P9-201ENST00000426076 1612 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC087190.4-201ENST00000574616 8334 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 U3.4-201ENST00000363352 213 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 RNU1-83P-201ENST00000363426 164 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 RNA5SP242-201ENST00000364171 118 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 RNU6-777P-201ENST00000364265 104 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 SNORA66-201ENST00000384792 133 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 RN7SKP273-201ENST00000411392 314 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL513325.1-201ENST00000417716 1034 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL389915.1-201ENST00000422463 466 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 RPS27AP7-201ENST00000422792 455 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 EIF4HP2-201ENST00000424380 563 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC005517.2-201ENST00000424673 553 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 RPS27AP12-201ENST00000429552 465 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL590233.1-201ENST00000430017 456 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC010153.1-201ENST00000432862 727 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 THAP5P1-201ENST00000439089 262 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC002381.1-201ENST00000447049 280 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 MTCO2P18-201ENST00000457151 658 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC146507.1-201ENST00000468335 354 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC104563.1-201ENST00000476147 376 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 RAP1BP2-201ENST00000478270 544 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 RN7SL441P-201ENST00000492388 296 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC091965.2-201ENST00000512324 613 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 OR5AP1P-201ENST00000529730 940 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AL049779.2-201ENST00000553847 315 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC073544.2-201ENST00000601155 540 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 LLPHP1-201ENST00000603571 367 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC103792.1-201ENST00000603591 919 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 AC103710.4-201ENST00000609301 899 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 BMS1P21-201ENST00000634565 365 ntBASIC4.73□□□□□ -1.65
RNF220Q5VTB9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF220Q5VTB9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC008549.2-201ENST00000333482 706 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 MIR323A-201ENST00000362199 86 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RNU6-28P-201ENST00000362378 107 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RNU5F-7P-201ENST00000363696 115 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RN7SKP113-201ENST00000363891 295 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 Y_RNA.436-201ENST00000384097 102 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RNU6-356P-201ENST00000384140 107 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RNU6-339P-201ENST00000384310 107 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 MIR1305-201ENST00000408300 86 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 OR3A2-201ENST00000408891 1076 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RPS27AP14-201ENST00000422868 454 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 CYCSP46-201ENST00000423569 204 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AL121776.1-201ENST00000429337 372 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RPS27P18-201ENST00000431701 247 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 UBE2V1P3-201ENST00000439651 417 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AL590399.6-201ENST00000446396 307 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 MTCO2P7-201ENST00000446518 666 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC004980.3-201ENST00000447046 365 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 EPS15P1-201ENST00000448836 336 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC010733.1-201ENST00000451515 401 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 HIGD1AP8-201ENST00000453927 274 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RPS20P24-201ENST00000457473 361 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RPL5P30-201ENST00000465511 891 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms