Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 SPATA31C1-201ENST00000420021 3895 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 CDY11P-201ENST00000447168 1651 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 ZNF807-201ENST00000328088 1707 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 Y_RNA.527-201ENST00000384573 102 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 RPS6P23-201ENST00000413224 722 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AC092634.6-201ENST00000418558 192 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 MTND3P16-201ENST00000452205 344 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AP003072.2-201ENST00000527756 676 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AP002373.2-201ENST00000541631 1060 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 MIR4311-201ENST00000580794 100 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 RNU6-89P-201ENST00000606519 100 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 AC138627.2-201ENST00000624202 601 ntBASIC7.16□□□□□ -1.26
RC3H1Q5TC82 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RC3H1Q5TC82 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AP004607.3-201ENST00000530354 3915 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AL121768.1-201ENST00000613917 2544 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 SNRPEP3-201ENST00000338402 276 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 RNU6-108P-201ENST00000365558 107 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 SNORA20.2-201ENST00000383922 131 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 RNU6-26P-201ENST00000383985 107 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 BTBD10P2-201ENST00000404779 676 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 UQCRBP1-201ENST00000421129 336 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC007568.1-201ENST00000422912 471 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 PRPF38AP2-201ENST00000438179 851 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 FABP5P2-201ENST00000439042 408 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AL772161.1-201ENST00000439130 476 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC105399.1-202ENST00000447303 205 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC104058.1-201ENST00000448028 297 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 MRPS31P2-201ENST00000451581 518 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AL163973.1-201ENST00000484753 577 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 RNA5SP116-201ENST00000516132 98 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 RNU6-201P-201ENST00000517100 61 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 HMGB1P19-201ENST00000517578 577 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC105031.1-201ENST00000518550 476 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC022616.6-201ENST00000520479 119 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 OR5M2P-201ENST00000529003 936 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 RGS4-209ENST00000531057 544 ntTSL 4 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC007375.1-201ENST00000554513 578 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 MTCO3P23-201ENST00000561363 289 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 OR1F2P-201ENST00000570470 933 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 TVP23CP2-201ENST00000571473 623 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms