Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
TPM4P67936 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.76□□□□□ -1.81
TPM4P67936 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.76□□□□□ -1.81
TPM4P67936 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TPM4P67936 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TPM4P67936 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TPM4P67936 DYNLT3P1-201ENST00000378574 347 ntBASIC3.75□□□□□ -1.81
TPM4P67936 RNU6-317P-201ENST00000384031 107 ntBASIC3.75□□□□□ -1.81
TPM4P67936 ATP5A1P2-201ENST00000412323 255 ntBASIC3.75□□□□□ -1.81
TPM4P67936 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TPM4P67936 SDCBPP3-201ENST00000419629 891 ntBASIC3.75□□□□□ -1.81
TPM4P67936 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TPM4P67936 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TPM4P67936 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.75□□□□□ -1.81
TPM4P67936 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.75□□□□□ -1.81
TPM4P67936 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.75□□□□□ -1.81
TPM4P67936 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.75□□□□□ -1.81
TPM4P67936 PTGES3P3-201ENST00000511479 482 ntBASIC3.75□□□□□ -1.81
TPM4P67936 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.75□□□□□ -1.81
TPM4P67936 SNORA70.18-201ENST00000516696 98 ntBASIC3.75□□□□□ -1.81
TPM4P67936 RNU6-1308P-201ENST00000516817 103 ntBASIC3.75□□□□□ -1.81
TPM4P67936 RN7SKP116-201ENST00000516902 319 ntBASIC3.75□□□□□ -1.81
TPM4P67936 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.75□□□□□ -1.81
TPM4P67936 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.75□□□□□ -1.81
TPM4P67936 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.75□□□□□ -1.81
TPM4P67936 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.75□□□□□ -1.81
TPM4P67936 MIR5685-201ENST00000579080 79 ntBASIC3.75□□□□□ -1.81
TPM4P67936 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.75□□□□□ -1.81
TPM4P67936 AC113194.1-201ENST00000606037 500 ntBASIC3.75□□□□□ -1.81
TPM4P67936 AC112503.1-201ENST00000608436 391 ntBASIC3.75□□□□□ -1.81
TPM4P67936 AL391497.1-201ENST00000608671 547 ntBASIC3.75□□□□□ -1.81
TPM4P67936 AC005021.1-201ENST00000608730 355 ntBASIC3.75□□□□□ -1.81
TPM4P67936 AC011472.4-201ENST00000615848 491 ntBASIC3.75□□□□□ -1.81
TPM4P67936 AC119674.1-207ENST00000641355 633 ntBASIC3.75□□□□□ -1.81
TPM4P67936 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.75□□□□□ -1.81
TPM4P67936 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TPM4P67936 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TPM4P67936 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TPM4P67936 AC006042.3-201ENST00000454684 1469 ntBASIC3.74□□□□□ -1.81
TPM4P67936 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TPM4P67936 RNA5SP189-201ENST00000364920 115 ntBASIC3.74□□□□□ -1.81
TPM4P67936 RNU6-356P-201ENST00000384140 107 ntBASIC3.74□□□□□ -1.81
TPM4P67936 SNORA70E-201ENST00000384492 135 ntBASIC3.74□□□□□ -1.81
TPM4P67936 PPIAP31-201ENST00000405422 495 ntBASIC3.74□□□□□ -1.81
TPM4P67936 DBIP2-201ENST00000419076 262 ntBASIC3.74□□□□□ -1.81
TPM4P67936 AC008065.1-201ENST00000428525 348 ntBASIC3.74□□□□□ -1.81
TPM4P67936 ETF1P3-201ENST00000430422 1160 ntBASIC3.74□□□□□ -1.81
TPM4P67936 AL392003.1-201ENST00000434394 243 ntBASIC3.74□□□□□ -1.81
TPM4P67936 OR4C10P-201ENST00000434991 931 ntBASIC3.74□□□□□ -1.81
TPM4P67936 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.74□□□□□ -1.81
TPM4P67936 AC239367.2-201ENST00000447309 705 ntBASIC3.74□□□□□ -1.81
TPM4P67936 NPM1P49-201ENST00000448027 714 ntBASIC3.74□□□□□ -1.81
TPM4P67936 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.74□□□□□ -1.81
TPM4P67936 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.74□□□□□ -1.81
TPM4P67936 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.74□□□□□ -1.81
TPM4P67936 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.74□□□□□ -1.81
TPM4P67936 RNU4-60P-201ENST00000517239 135 ntBASIC3.74□□□□□ -1.81
TPM4P67936 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TPM4P67936 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.74□□□□□ -1.81
TPM4P67936 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.74□□□□□ -1.81
TPM4P67936 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.74□□□□□ -1.81
TPM4P67936 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.74□□□□□ -1.81
TPM4P67936 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.74□□□□□ -1.81
TPM4P67936 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TPM4P67936 AL591516.1-201ENST00000611326 274 ntBASIC3.74□□□□□ -1.81
TPM4P67936 AC048347.1-201ENST00000624621 427 ntBASIC3.74□□□□□ -1.81
TPM4P67936 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TPM4P67936 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TPM4P67936 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TPM4P67936 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TPM4P67936 AC087565.3-202ENST00000642085 1603 ntBASIC3.73□□□□□ -1.81
TPM4P67936 RNA5SP51-201ENST00000364750 119 ntBASIC3.73□□□□□ -1.81
TPM4P67936 AL049693.1-201ENST00000402760 611 ntBASIC3.73□□□□□ -1.81
TPM4P67936 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM4P67936 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TPM4P67936 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.73□□□□□ -1.81
TPM4P67936 ARL5AP2-201ENST00000444698 533 ntBASIC3.73□□□□□ -1.81
TPM4P67936 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM4P67936 AL157827.1-201ENST00000447622 132 ntBASIC3.73□□□□□ -1.81
TPM4P67936 AC115115.1-201ENST00000449927 248 ntBASIC3.73□□□□□ -1.81
TPM4P67936 AC010285.3-201ENST00000511668 676 ntBASIC3.73□□□□□ -1.81
TPM4P67936 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM4P67936 SOD1P3-201ENST00000518682 454 ntBASIC3.73□□□□□ -1.81
TPM4P67936 OR4R3P-201ENST00000525084 838 ntBASIC3.73□□□□□ -1.81
TPM4P67936 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM4P67936 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.73□□□□□ -1.81
TPM4P67936 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TPM4P67936 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TPM4P67936 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.73□□□□□ -1.81
TPM4P67936 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM4P67936 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.73□□□□□ -1.81
TPM4P67936 AC010928.3-201ENST00000587712 541 ntBASIC3.73□□□□□ -1.81
TPM4P67936 AL023583.1-201ENST00000607518 1143 ntBASIC3.73□□□□□ -1.81
TPM4P67936 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TPM4P67936 AL590410.1-201ENST00000617925 333 ntBASIC3.73□□□□□ -1.81
TPM4P67936 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TPM4P67936 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM4P67936 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.73□□□□□ -1.81
TPM4P67936 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TPM4P67936 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms