Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 PPBPP1-201ENST00000510807 373 ntBASIC4.2□□□□□ -1.74
CDH12P55289 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH12P55289 AF186190.1-201ENST00000517470 480 ntBASIC4.2□□□□□ -1.74
CDH12P55289 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH12P55289 HIGD1AP10-201ENST00000527837 282 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH12P55289 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH12P55289 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH12P55289 AL110118.1-201ENST00000553543 400 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 MTCYBP28-201ENST00000566728 1132 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 SNORD39.3-201ENST00000584451 71 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC110743.1-201ENST00000584870 478 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 AC020914.6-201ENST00000594327 272 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AL512782.1-201ENST00000603093 364 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC133644.2-201ENST00000608142 540 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC090425.2-201ENST00000608818 501 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AP000894.4-201ENST00000610185 483 ntBASIC4.2□□□□□ -1.74
CDH12P55289 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.2□□□□□ -1.74
CDH12P55289 SNX18P1Y-201ENST00000616231 511 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC123768.4-201ENST00000616244 701 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 AC008443.7-201ENST00000622195 246 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 AC018445.2-201ENST00000622987 260 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC098679.5-201ENST00000624394 571 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 AC099063.3-201ENST00000642066 185 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC107081.3-201ENST00000612715 2034 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH12P55289 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH12P55289 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH12P55289 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH12P55289 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH12P55289 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CDH12P55289 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CDH12P55289 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH12P55289 AL672167.1-206ENST00000356293 943 ntBASIC4.19□□□□□ -1.74
CDH12P55289 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH12P55289 MIR506-201ENST00000384998 124 ntBASIC4.19□□□□□ -1.74
CDH12P55289 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH12P55289 AL645927.1-201ENST00000396783 406 ntBASIC4.19□□□□□ -1.74
CDH12P55289 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CDH12P55289 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH12P55289 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH12P55289 TPMTP3-201ENST00000411928 735 ntBASIC4.19□□□□□ -1.74
CDH12P55289 RPL7P8-201ENST00000411964 730 ntBASIC4.19□□□□□ -1.74
CDH12P55289 BX510359.2-201ENST00000417920 305 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH12P55289 AP000936.2-201ENST00000447151 681 ntBASIC4.19□□□□□ -1.74
CDH12P55289 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH12P55289 MTCO3P11-201ENST00000455103 774 ntBASIC4.19□□□□□ -1.74
CDH12P55289 SCARNA10-201ENST00000459255 330 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC104763.1-201ENST00000475274 360 ntBASIC4.19□□□□□ -1.74
CDH12P55289 RPL30P11-201ENST00000495304 339 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH12P55289 AC108078.3-201ENST00000502633 489 ntBASIC4.19□□□□□ -1.74
CDH12P55289 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.19□□□□□ -1.74
CDH12P55289 SNX5P1-201ENST00000505757 1041 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH12P55289 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH12P55289 RNA5SP360-201ENST00000516555 118 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC106038.2-201ENST00000520706 568 ntBASIC4.19□□□□□ -1.74
CDH12P55289 ARL2BPP5-201ENST00000523141 481 ntBASIC4.19□□□□□ -1.74
CDH12P55289 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH12P55289 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH12P55289 AC092851.1-201ENST00000535964 478 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC090502.2-201ENST00000549267 280 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH12P55289 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH12P55289 AC090515.3-201ENST00000560431 315 ntBASIC4.19□□□□□ -1.74
CDH12P55289 MIR4646-201ENST00000580775 63 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC068790.2-201ENST00000602601 557 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH12P55289 AC090181.2-201ENST00000602975 672 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC087283.1-201ENST00000604029 1074 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC010201.1-201ENST00000605051 540 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AC116651.1-201ENST00000609724 556 ntBASIC4.19□□□□□ -1.74
CDH12P55289 HULC.1-201ENST00000612720 240 ntBASIC4.19□□□□□ -1.74
CDH12P55289 MIR6853-201ENST00000619642 74 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH12P55289 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.19□□□□□ -1.74
CDH12P55289 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH12P55289 OR14L1P-202ENST00000641545 3009 ntBASIC4.19□□□□□ -1.74
CDH12P55289 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH12P55289 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH12P55289 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDH12P55289 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH12P55289 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH12P55289 AC139769.1-204ENST00000472297 1931 ntBASIC4.19□□□□□ -1.74
CDH12P55289 OR5BR1P-201ENST00000524992 1330 ntBASIC4.19□□□□□ -1.74
CDH12P55289 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH12P55289 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms