Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RPS29P7-201ENST00000439662 171 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 AC004854.1-201ENST00000440356 349 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 MTND1P26-201ENST00000440488 538 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 HMGB1P16-201ENST00000447155 540 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 AL500522.2-201ENST00000448562 343 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 DNAJC19P8-201ENST00000452887 259 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMK2P53671 AC096992.1-201ENST00000459808 709 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK2P53671 RN7SL542P-201ENST00000467147 294 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 AC104689.1-201ENST00000473356 768 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 AP002812.1-201ENST00000495378 474 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 UBE2V1P12-201ENST00000503954 474 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.97□□□□□ -1.77
LIMK2P53671 BTF3L4P4-201ENST00000506381 449 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK2P53671 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMK2P53671 IGLVIV-53-201ENST00000520107 367 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMK2P53671 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMK2P53671 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.97□□□□□ -1.77
LIMK2P53671 AC139103.1-201ENST00000534696 1030 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMK2P53671 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.97□□□□□ -1.77
LIMK2P53671 AL606490.9-201ENST00000603331 271 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK2P53671 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.97□□□□□ -1.77
LIMK2P53671 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
LIMK2P53671 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMK2P53671 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LIMK2P53671 MAPK10-373ENST00000641983 6772 ntBASIC3.97□□□□□ -1.77
LIMK2P53671 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.96□□□□□ -1.77
LIMK2P53671 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMK2P53671 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK2P53671 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK2P53671 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LIMK2P53671 SNORA51.12-201ENST00000384448 134 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 DNAJC19P6-201ENST00000401853 280 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 HNRNPDP2-201ENST00000406475 478 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 SNORA11C-201ENST00000408532 129 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 RN7SKP56-201ENST00000410513 331 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 RPL7AP73-201ENST00000413490 353 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK2P53671 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMK2P53671 OR5BE1P-201ENST00000425977 939 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 HIGD1AP4-201ENST00000430194 280 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK2P53671 RRM2P4-201ENST00000441721 562 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK2P53671 AL133477.1-201ENST00000457472 514 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC091153.1-201ENST00000466297 402 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 RPS17P11-201ENST00000474297 293 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 RPS4XP6-201ENST00000477670 797 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 HMGB1P21-201ENST00000502313 581 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC146944.2-203ENST00000502493 354 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC139495.1-202ENST00000513164 354 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 SNORA67.7-201ENST00000516664 135 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 RNA5SP143-201ENST00000516936 115 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 RNU1-45P-201ENST00000517191 141 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMK2P53671 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMK2P53671 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK2P53671 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
LIMK2P53671 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK2P53671 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.96□□□□□ -1.78
LIMK2P53671 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.96□□□□□ -1.78
LIMK2P53671 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMK2P53671 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK2P53671 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMK2P53671 AC067852.4-201ENST00000590314 478 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC068313.1-201ENST00000604028 1008 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC013244.3-201ENST00000605614 388 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 MIR92B-201ENST00000607575 96 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC099669.2-201ENST00000616549 437 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC006133.1-201ENST00000617106 264 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC018926.3-201ENST00000618841 406 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMK2P53671 OR5BE1P-202ENST00000641168 1176 ntBASIC3.96□□□□□ -1.78
LIMK2P53671 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK2P53671 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LIMK2P53671 AC106754.1-201ENST00000562632 1513 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK2P53671 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK2P53671 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
LIMK2P53671 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
LIMK2P53671 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK2P53671 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 MTCO1P6-201ENST00000481192 1384 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 AL512646.1-201ENST00000269395 1077 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 RNA5SP399-201ENST00000364003 117 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK2P53671 SNORD65C-201ENST00000390962 71 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.95□□□□□ -1.78
LIMK2P53671 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.95□□□□□ -1.78
LIMK2P53671 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 AC106883.1-201ENST00000418805 562 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK2P53671 AC114814.2-201ENST00000419195 485 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 AL389915.1-201ENST00000422463 466 ntBASIC3.95□□□□□ -1.78
LIMK2P53671 AC241520.1-201ENST00000422654 1099 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms