Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-636P-201ENST00000384598 107 ntBASIC4.05□□□□□ -1.76
PDX1P52945 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDX1P52945 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.05□□□□□ -1.76
PDX1P52945 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 RPF2P1-201ENST00000424137 906 ntBASIC4.05□□□□□ -1.76
PDX1P52945 OR8F1P-201ENST00000425243 930 ntBASIC4.05□□□□□ -1.76
PDX1P52945 MTCO1P3-201ENST00000429327 192 ntBASIC4.05□□□□□ -1.76
PDX1P52945 RPL37P1-201ENST00000432310 284 ntBASIC4.05□□□□□ -1.76
PDX1P52945 CEACAMP1-201ENST00000434624 1035 ntBASIC4.05□□□□□ -1.76
PDX1P52945 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 ELOCP13-201ENST00000443934 329 ntBASIC4.05□□□□□ -1.76
PDX1P52945 HMGB1P48-201ENST00000446155 598 ntBASIC4.05□□□□□ -1.76
PDX1P52945 RPL7P59-201ENST00000447700 943 ntBASIC4.05□□□□□ -1.76
PDX1P52945 AC004022.1-201ENST00000447766 1066 ntBASIC4.05□□□□□ -1.76
PDX1P52945 RPL7P22-201ENST00000466005 733 ntBASIC4.05□□□□□ -1.76
PDX1P52945 AC010460.1-201ENST00000507087 466 ntBASIC4.05□□□□□ -1.76
PDX1P52945 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
PDX1P52945 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 KRT19P6-201ENST00000510983 209 ntBASIC4.05□□□□□ -1.76
PDX1P52945 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.05□□□□□ -1.76
PDX1P52945 OR4A2P-201ENST00000527276 913 ntBASIC4.05□□□□□ -1.76
PDX1P52945 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.05□□□□□ -1.76
PDX1P52945 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.05□□□□□ -1.76
PDX1P52945 AL352979.3-201ENST00000553515 247 ntBASIC4.05□□□□□ -1.76
PDX1P52945 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 AC140725.3-201ENST00000616193 880 ntBASIC4.05□□□□□ -1.76
PDX1P52945 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.05□□□□□ -1.76
PDX1P52945 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 AC013470.4-201ENST00000619978 986 ntBASIC4.05□□□□□ -1.76
PDX1P52945 MIR7154-201ENST00000620673 73 ntBASIC4.05□□□□□ -1.76
PDX1P52945 RNU6-156P-201ENST00000621869 107 ntBASIC4.05□□□□□ -1.76
PDX1P52945 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDX1P52945 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PDX1P52945 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDX1P52945 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDX1P52945 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
PDX1P52945 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDX1P52945 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.04□□□□□ -1.76
PDX1P52945 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PDX1P52945 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDX1P52945 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
PDX1P52945 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDX1P52945 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDX1P52945 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDX1P52945 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDX1P52945 RNU6-839P-201ENST00000363347 108 ntBASIC4.04□□□□□ -1.76
PDX1P52945 SNORA62.3-201ENST00000365110 153 ntBASIC4.04□□□□□ -1.76
PDX1P52945 SNORD116.1-201ENST00000365628 92 ntBASIC4.04□□□□□ -1.76
PDX1P52945 RNU6-146P-201ENST00000384602 108 ntBASIC4.04□□□□□ -1.76
PDX1P52945 SNORD66.1-201ENST00000391230 76 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.04□□□□□ -1.76
PDX1P52945 TPT1P2-201ENST00000413105 503 ntBASIC4.04□□□□□ -1.76
PDX1P52945 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AL445584.1-201ENST00000431451 330 ntBASIC4.04□□□□□ -1.76
PDX1P52945 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.04□□□□□ -1.76
PDX1P52945 CR769776.1-201ENST00000441254 787 ntBASIC4.04□□□□□ -1.76
PDX1P52945 ABCF2P2-201ENST00000450549 296 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.04□□□□□ -1.76
PDX1P52945 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.04□□□□□ -1.76
PDX1P52945 NF1P3-201ENST00000457709 450 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AL139824.2-201ENST00000458731 1095 ntBASIC4.04□□□□□ -1.76
PDX1P52945 snoU13.22-201ENST00000459428 104 ntBASIC4.04□□□□□ -1.76
PDX1P52945 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 RPS26P28-201ENST00000470806 348 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.04□□□□□ -1.76
PDX1P52945 AC011037.1-201ENST00000483964 558 ntBASIC4.04□□□□□ -1.76
PDX1P52945 DYNLL1P6-201ENST00000503440 264 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.04□□□□□ -1.76
PDX1P52945 AC113430.1-201ENST00000506872 718 ntBASIC4.04□□□□□ -1.76
PDX1P52945 RNU6-885P-201ENST00000516607 104 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.04□□□□□ -1.76
PDX1P52945 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 IFITM8P-201ENST00000522529 394 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.04□□□□□ -1.76
PDX1P52945 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 AL121834.1-201ENST00000572284 509 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.04□□□□□ -1.76
PDX1P52945 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.04□□□□□ -1.76
PDX1P52945 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.04□□□□□ -1.76
PDX1P52945 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms