Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MSH6P52701 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
MSH6P52701 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
MSH6P52701 OR5J1P-201ENST00000313544 939 ntBASIC4.59□□□□□ -1.67
MSH6P52701 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MSH6P52701 MTND4P22-201ENST00000413116 1169 ntBASIC4.59□□□□□ -1.67
MSH6P52701 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH6P52701 AL034379.1-201ENST00000423216 253 ntBASIC4.59□□□□□ -1.67
MSH6P52701 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH6P52701 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH6P52701 AC016687.1-201ENST00000482574 353 ntBASIC4.59□□□□□ -1.67
MSH6P52701 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH6P52701 AC113398.2-201ENST00000507630 558 ntBASIC4.59□□□□□ -1.67
MSH6P52701 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.59□□□□□ -1.67
MSH6P52701 H3F3AP1-201ENST00000559984 334 ntBASIC4.59□□□□□ -1.67
MSH6P52701 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.59□□□□□ -1.67
MSH6P52701 AL450472.3-201ENST00000615578 367 ntBASIC4.59□□□□□ -1.67
MSH6P52701 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MSH6P52701 RIOK3P1-201ENST00000418778 1528 ntBASIC4.59□□□□□ -1.67
MSH6P52701 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
MSH6P52701 AL136360.1-201ENST00000503377 1900 ntBASIC4.59□□□□□ -1.67
MSH6P52701 AL031985.3-201ENST00000565390 2449 ntBASIC4.59□□□□□ -1.68
MSH6P52701 AC073073.2-201ENST00000609827 2578 ntBASIC4.59□□□□□ -1.68
MSH6P52701 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH6P52701 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MSH6P52701 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MSH6P52701 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH6P52701 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH6P52701 RNA5SP502-201ENST00000362694 119 ntBASIC4.58□□□□□ -1.68
MSH6P52701 RNU6-283P-201ENST00000364788 107 ntBASIC4.58□□□□□ -1.68
MSH6P52701 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.58□□□□□ -1.68
MSH6P52701 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.58□□□□□ -1.68
MSH6P52701 AC073069.1-201ENST00000428657 441 ntBASIC4.58□□□□□ -1.68
MSH6P52701 AC000041.1-201ENST00000439655 175 ntBASIC4.58□□□□□ -1.68
MSH6P52701 ATP5C1P1-201ENST00000441945 895 ntBASIC4.58□□□□□ -1.68
MSH6P52701 NPM1P13-201ENST00000452663 865 ntBASIC4.58□□□□□ -1.68
MSH6P52701 RN7SL93P-201ENST00000463035 293 ntBASIC4.58□□□□□ -1.68
MSH6P52701 NPM1P17-201ENST00000479221 602 ntBASIC4.58□□□□□ -1.68
MSH6P52701 RNU4-18P-201ENST00000516751 149 ntBASIC4.58□□□□□ -1.68
MSH6P52701 NDUFB9P3-201ENST00000521269 501 ntBASIC4.58□□□□□ -1.68
MSH6P52701 AC141257.3-201ENST00000572906 215 ntBASIC4.58□□□□□ -1.68
MSH6P52701 AC020914.4-201ENST00000597690 277 ntBASIC4.58□□□□□ -1.68
MSH6P52701 VN1R81P-201ENST00000602085 372 ntBASIC4.58□□□□□ -1.68
MSH6P52701 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH6P52701 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH6P52701 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.58□□□□□ -1.68
MSH6P52701 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH6P52701 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.57□□□□□ -1.68
MSH6P52701 THAP12P8-201ENST00000447914 2115 ntBASIC4.57□□□□□ -1.68
MSH6P52701 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.57□□□□□ -1.68
MSH6P52701 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH6P52701 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH6P52701 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH6P52701 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH6P52701 AL121890.1-201ENST00000435457 205 ntBASIC4.57□□□□□ -1.68
MSH6P52701 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH6P52701 DNAJC19P1-201ENST00000455312 319 ntBASIC4.57□□□□□ -1.68
MSH6P52701 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
MSH6P52701 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.57□□□□□ -1.68
MSH6P52701 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH6P52701 AC099489.2-201ENST00000574976 260 ntBASIC4.57□□□□□ -1.68
MSH6P52701 AC124856.1-201ENST00000600819 896 ntBASIC4.57□□□□□ -1.68
MSH6P52701 SNORA35B-201ENST00000607417 129 ntBASIC4.57□□□□□ -1.68
MSH6P52701 AL157817.1-201ENST00000614264 790 ntBASIC4.57□□□□□ -1.68
MSH6P52701 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
MSH6P52701 AL355596.1-201ENST00000565399 3996 ntBASIC4.57□□□□□ -1.68
MSH6P52701 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MSH6P52701 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
MSH6P52701 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.57□□□□□ -1.68
MSH6P52701 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
MSH6P52701 AC093908.1-201ENST00000623125 8092 ntBASIC4.57□□□□□ -1.68
MSH6P52701 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH6P52701 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH6P52701 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
MSH6P52701 Z99755.1-201ENST00000414048 380 ntBASIC4.56□□□□□ -1.68
MSH6P52701 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.56□□□□□ -1.68
MSH6P52701 MTCO3P42-201ENST00000509488 518 ntBASIC4.56□□□□□ -1.68
MSH6P52701 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.56□□□□□ -1.68
MSH6P52701 MTCO3P39-201ENST00000514812 518 ntBASIC4.56□□□□□ -1.68
MSH6P52701 OR5AP1P-201ENST00000529730 940 ntBASIC4.56□□□□□ -1.68
MSH6P52701 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MSH6P52701 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.56□□□□□ -1.68
MSH6P52701 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.56□□□□□ -1.68
MSH6P52701 AL137072.1-201ENST00000603444 466 ntBASIC4.56□□□□□ -1.68
MSH6P52701 BNIP3P10-201ENST00000605360 577 ntBASIC4.56□□□□□ -1.68
MSH6P52701 AC112503.1-201ENST00000608436 391 ntBASIC4.56□□□□□ -1.68
MSH6P52701 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH6P52701 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH6P52701 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH6P52701 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH6P52701 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.56□□□□□ -1.68
MSH6P52701 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
MSH6P52701 CR381670.1-201ENST00000624291 1693 ntBASIC4.56□□□□□ -1.68
MSH6P52701 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
MSH6P52701 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH6P52701 AL359693.1-201ENST00000614959 2407 ntBASIC4.56□□□□□ -1.68
MSH6P52701 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH6P52701 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH6P52701 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MSH6P52701 SNORA7.4-201ENST00000384249 137 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms