Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC017071.1-201ENST00000564407 2204 ntBASIC4.54□□□□□ -1.68
CPS1P31327 AC017007.4-201ENST00000503353 1352 ntBASIC4.54□□□□□ -1.68
CPS1P31327 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPS1P31327 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CPS1P31327 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPS1P31327 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.53□□□□□ -1.68
CPS1P31327 SNORA71.1-201ENST00000364523 117 ntBASIC4.53□□□□□ -1.68
CPS1P31327 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.53□□□□□ -1.68
CPS1P31327 SKP1P1-201ENST00000438081 489 ntBASIC4.53□□□□□ -1.68
CPS1P31327 FCF1P3-201ENST00000496394 590 ntBASIC4.53□□□□□ -1.68
CPS1P31327 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.53□□□□□ -1.68
CPS1P31327 AL139174.1-201ENST00000531489 886 ntBASIC4.53□□□□□ -1.68
CPS1P31327 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.53□□□□□ -1.68
CPS1P31327 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.53□□□□□ -1.68
CPS1P31327 VN1R90P-201ENST00000595717 726 ntBASIC4.53□□□□□ -1.68
CPS1P31327 BNIP3P38-201ENST00000601117 544 ntBASIC4.53□□□□□ -1.68
CPS1P31327 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.53□□□□□ -1.68
CPS1P31327 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.53□□□□□ -1.68
CPS1P31327 CR381670.1-201ENST00000624291 1693 ntBASIC4.53□□□□□ -1.68
CPS1P31327 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPS1P31327 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPS1P31327 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPS1P31327 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPS1P31327 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CPS1P31327 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CPS1P31327 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CPS1P31327 AC073325.2-201ENST00000339545 159 ntBASIC4.52□□□□□ -1.69
CPS1P31327 U3.12-201ENST00000364498 214 ntBASIC4.52□□□□□ -1.69
CPS1P31327 OR13C3-201ENST00000374781 1108 ntBASIC4.52□□□□□ -1.69
CPS1P31327 HMGB1P18-201ENST00000438801 619 ntBASIC4.52□□□□□ -1.69
CPS1P31327 RPL23AP71-201ENST00000470966 469 ntBASIC4.52□□□□□ -1.69
CPS1P31327 ACTG1P13-201ENST00000486987 1043 ntBASIC4.52□□□□□ -1.69
CPS1P31327 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.52□□□□□ -1.69
CPS1P31327 AC114781.4-201ENST00000513707 639 ntBASIC4.52□□□□□ -1.69
CPS1P31327 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.52□□□□□ -1.69
CPS1P31327 AL390334.1-201ENST00000556395 450 ntBASIC4.52□□□□□ -1.69
CPS1P31327 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.52□□□□□ -1.69
CPS1P31327 AL162574.2-201ENST00000614618 657 ntBASIC4.52□□□□□ -1.69
CPS1P31327 MIR4727-201ENST00000622232 55 ntBASIC4.52□□□□□ -1.69
CPS1P31327 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CPS1P31327 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPS1P31327 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPS1P31327 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.52□□□□□ -1.69
CPS1P31327 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.52□□□□□ -1.69
CPS1P31327 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CPS1P31327 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPS1P31327 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.52□□□□□ -1.69
CPS1P31327 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPS1P31327 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPS1P31327 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPS1P31327 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
CPS1P31327 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.52□□□□□ -1.69
CPS1P31327 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPS1P31327 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPS1P31327 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CPS1P31327 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CPS1P31327 AC004552.1-201ENST00000419089 348 ntBASIC4.51□□□□□ -1.69
CPS1P31327 MRPS33P4-201ENST00000434892 317 ntBASIC4.51□□□□□ -1.69
CPS1P31327 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.51□□□□□ -1.69
CPS1P31327 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.51□□□□□ -1.69
CPS1P31327 HMGB1P16-201ENST00000447155 540 ntBASIC4.51□□□□□ -1.69
CPS1P31327 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.51□□□□□ -1.69
CPS1P31327 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPS1P31327 SETP12-201ENST00000514068 805 ntBASIC4.51□□□□□ -1.69
CPS1P31327 SCARNA20.6-201ENST00000517251 106 ntBASIC4.51□□□□□ -1.69
CPS1P31327 AC009812.2-201ENST00000517657 457 ntBASIC4.51□□□□□ -1.69
CPS1P31327 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.51□□□□□ -1.69
CPS1P31327 AC023389.2-201ENST00000580031 955 ntBASIC4.51□□□□□ -1.69
CPS1P31327 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.51□□□□□ -1.69
CPS1P31327 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.51□□□□□ -1.69
CPS1P31327 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CPS1P31327 AL356321.1-201ENST00000621360 228 ntBASIC4.51□□□□□ -1.69
CPS1P31327 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CPS1P31327 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.51□□□□□ -1.69
CPS1P31327 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPS1P31327 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CPS1P31327 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CPS1P31327 RN7SKP220-201ENST00000410611 288 ntBASIC4.51□□□□□ -1.69
CPS1P31327 AC126124.2-201ENST00000413542 321 ntBASIC4.51□□□□□ -1.69
CPS1P31327 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.51□□□□□ -1.69
CPS1P31327 AC019097.1-201ENST00000424783 735 ntBASIC4.51□□□□□ -1.69
CPS1P31327 MTND2P25-201ENST00000449028 610 ntBASIC4.51□□□□□ -1.69
CPS1P31327 AP002884.2-201ENST00000471647 395 ntBASIC4.51□□□□□ -1.69
CPS1P31327 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.51□□□□□ -1.69
CPS1P31327 AC099489.2-201ENST00000574976 260 ntBASIC4.51□□□□□ -1.69
CPS1P31327 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.51□□□□□ -1.69
CPS1P31327 CYCSP41-201ENST00000616920 296 ntBASIC4.51□□□□□ -1.69
CPS1P31327 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPS1P31327 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.5□□□□□ -1.69
CPS1P31327 RNA5SP322-201ENST00000363617 119 ntBASIC4.5□□□□□ -1.69
CPS1P31327 RNA5SP508-201ENST00000411327 119 ntBASIC4.5□□□□□ -1.69
CPS1P31327 BMS1P22-201ENST00000414726 313 ntBASIC4.5□□□□□ -1.69
CPS1P31327 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.5□□□□□ -1.69
CPS1P31327 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.5□□□□□ -1.69
CPS1P31327 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.5□□□□□ -1.69
CPS1P31327 DNAJC19P1-201ENST00000455312 319 ntBASIC4.5□□□□□ -1.69
CPS1P31327 RPS4XP13-201ENST00000483219 789 ntBASIC4.5□□□□□ -1.69
CPS1P31327 RPL7P47-201ENST00000497299 556 ntBASIC4.5□□□□□ -1.69
CPS1P31327 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.5□□□□□ -1.69
CPS1P31327 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms